Trichormus variabilis: Ava_2076
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Entry
Ava_2076 CDS
T00277
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ava
Trichormus variabilis
Pathway
ava00260
Glycine, serine and threonine metabolism
ava00460
Cyanoamino acid metabolism
ava00630
Glyoxylate and dicarboxylate metabolism
ava00670
One carbon pool by folate
ava00680
Methane metabolism
ava01100
Metabolic pathways
ava01110
Biosynthesis of secondary metabolites
ava01120
Microbial metabolism in diverse environments
ava01200
Carbon metabolism
ava01230
Biosynthesis of amino acids
ava01240
Biosynthesis of cofactors
ava04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ava_2076
09102 Energy metabolism
00680 Methane metabolism
Ava_2076
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Ava_2076
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Ava_2076
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Ava_2076
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Ava_2076
Enzymes [BR:
ava01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Ava_2076
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ABA21698
UniProt:
Q3MBD8
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All DBs
Position
2566699..2567982
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AA seq
427 aa
AA seq
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MTRTNSDFLTNSDPAIAGLINQELQRQRDHLELIASENFTSAAVLAAQGSVLTNKYAEGL
PGKRYYGGCEFIDKIEQIAIDRAKQLFGAAHANVQPHSGAQANFAVFLTLLAPGDKIMGM
DLSHGGHLTHGSPVNVSGKWFQVCHYGVSQQTEQLDYDQIRELALRERPKLLICGYSAYP
RIIDFEKFRSIADEVGAYLLADIAHIAGLVASGLHPDPIPYCHVVTTTTHKTLRGPRGGL
ILTGDAELGKKLDKSVFPGSQGGPLEHVIAGKAVAFGEALKPEFQGYSAQVIENARALAN
QLQNRGLKLVSDGTDNHLMLVDLRSVNMTGKRADQLVSEVNITANKNTVPFDPQSPFVTS
GLRLGSPAMTTRGMGEAEFTEIGNIIADRLLNPDSDTVAQDCKRRVAALCDRFPLYPHLE
IPVPVLA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgactagaacaaattcagattttctcactaattctgatccagcgatcgccggattgatt
aatcaagaactccaacgtcaacgggaccacttggagttaatcgccagtgaaaactttacc
tcggcggctgtcttggcggctcagggttcggtactgacaaataaatacgctgaggggctg
ccaggtaagcgctactacggtggttgtgagtttatcgataaaatcgagcaaatagccatt
gaccgcgctaaacagctatttggtgccgctcatgccaacgtccaaccccattccggcgca
caagccaattttgctgttttcctgactttactcgcaccaggagacaaaatcatggggatg
gatttgtctcatggtggacacctcacccacggttccccggtaaacgtttccggtaagtgg
ttccaagtttgccactacggtgtcagtcaacaaacagaacaactagactatgaccaaatt
cgtgagctggcgctgagggagcgtcctaagcttttgatttgtggttattctgcttatccc
cgaattattgactttgaaaagttccgcagcatcgccgatgaagttggcgcgtatttgctg
gcggatattgcccacattgccggtttagtcgcaagtggactgcaccccgaccccatacct
tactgtcacgtcgtcacaactaccacccataaaaccctccgtggccccagaggtggttta
attttgaccggtgacgcagaactcggtaaaaaattggataaatccgtttttcctggaagc
caagggggaccgttagaacacgtaattgctgggaaagcagttgcttttggtgaagcctta
aagccagaatttcaaggctattcagcccaagtaattgagaatgctcgtgctttggcaaat
caactccagaatcgtggattaaagcttgtatccgatggtacggataaccacctaatgctc
gtagatttacggtctgtgaacatgacaggtaaacgagcagaccagttagtgagtgaagta
aatatcaccgctaataaaaatacggttcccttcgatccccaatcaccatttgttaccagt
ggtttgcgcttgggttccccagctatgactacacgaggaatgggagaggcagaatttacc
gaaattggtaatattatcgccgatcgcctactcaacccagattcagacacagtcgcccaa
gattgtaaacgccgggtagccgcattgtgcgatcgcttccccttatatccacacttggaa
attcctgtaccagtcttagcttag
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