Trichormus variabilis: Ava_2115
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Entry
Ava_2115 CDS
T00277
Name
(GenBank) phenylalanyl-tRNA synthetase, alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
ava
Trichormus variabilis
Pathway
ava00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Ava_2115
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ava01007
]
Ava_2115
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ava03016
]
Ava_2115
Enzymes [BR:
ava01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Ava_2115
Amino acid related enzymes [BR:
ava01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Ava_2115
Transfer RNA biogenesis [BR:
ava03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Ava_2115
Prokaryotic type
Ava_2115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
Phe_tRNA-synt_N
Motif
Other DBs
NCBI-ProteinID:
ABA21737
UniProt:
Q3MB99
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All DBs
Position
complement(2616185..2617177)
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AA seq
330 aa
AA seq
DB search
MTSNLEAQLLALRQEGEQAIAAADTLERLEELRVSYLGKKGQLGALLRSMGQMSAEERPK
IGAIANTVKEALQASLDKQRESLESAQIQAQLDAETLDVTMPGIYKPQGRIHPLNGIIDR
ALDVFVGLGYTVAQGLEMETDYYNFEALNTPPDHPARDMQDTFYLPDGNLLRTHTSSVQI
RYMEKEEPPIHIVAPGRVYRRDNVDATHSAVFHQIELLAIDEGLTFTDLKGTIKVFLQAM
FGDLPIRFRASYFPFTEPSAEVDLQWNGRWLEVMGCGMVDPNVMKSVGYDPEIYTGFAAG
FGVERFAMVLHQIDDIRRLYASDLRFLRQF
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgactagcaacttagaagctcaacttttagcattgcggcaggaaggagaacaggcgatc
gccgccgccgataccctcgaacgtctggaggaactcagagttagttatctgggcaaaaaa
gggcaattgggggctttgttgcgaagcatggggcagatgagtgcagaggaacgaccgaaa
attggagcgatcgccaatacggttaaggaagccctacaggctagtttagataagcaacgg
gaatctttagaatctgcccaaattcaggcacagcttgacgcggaaacccttgatgtcact
atgcctggtatttacaagccgcaaggacgtattcaccccctaaatggcatcatcgaccgg
gcgctagatgtttttgtgggcttgggctacacggtggcgcaaggattggagatggagaca
gattactacaattttgaagctctcaacactccaccagaccaccccgcccgtgatatgcag
gatactttctatctcccagacggtaatctcctgcgtactcacacctcatcggtgcaaatt
cgttatatggaaaaagaggaaccaccaattcatattgtggctcctggacgagtttatcgg
cgagataatgtagatgccacccactcggcagttttccatcaaattgagttgttagccatt
gatgaggggctaacttttaccgacctcaaaggcactattaaagtgtttttgcaagctatg
tttggtgatttaccaattcgtttccgtgctagttacttcccgtttaccgaaccctcggct
gaggtagatttgcagtggaatgggcgctggctggaagtcatgggttgcggtatggtcgat
cccaatgtcatgaaatctgtaggctatgacccagaaatttatactggctttgcggctggt
tttggtgtcgaacgctttgcaatggtgttacaccaaatcgacgatatccgtcgtttatat
gctagtgatttacggtttttgcgtcagttttaa
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