Trichormus variabilis: Ava_2260
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Entry
Ava_2260 CDS
T00277
Name
(GenBank) histidyl-tRNA synthetase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
ava
Trichormus variabilis
Pathway
ava00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Ava_2260
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ava01007
]
Ava_2260
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ava03016
]
Ava_2260
Enzymes [BR:
ava01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
Ava_2260
Amino acid related enzymes [BR:
ava01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Ava_2260
Transfer RNA biogenesis [BR:
ava03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Ava_2260
Prokaryotic type
Ava_2260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
Rota_NS35_N
Motif
Other DBs
NCBI-ProteinID:
ABA21878
UniProt:
Q3MAV8
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All DBs
Position
2816637..2818025
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AA seq
462 aa
AA seq
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MAKNDKINFSTPSGFPEFLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKG
NQGDNIIYGIDPILPPNRQAEKDKSGETGSEARALKFDQTVPLAAYIARHLNELTFPFAR
YQMDVVFRGERAKDGRFRQFRQCDIDVVGREKLSLLYDAQMPAIITEIFEAVHIGDFLIR
INNRKVLTGFFQSLDISETQIKSCISIIDNLEKIGEAKVKLELEKEGINPEQTQKIIDFI
KIDGSVDDVLDKLKHLSQTLPESEQFNLGVSELETVITGVRNLGVPDKRFCIDLAIARGL
NYYTGTVYETTLIGHEALGSICSGGRYEELVGTFIGEKMPGVGISIGLTRLISRLLKAGI
LNTLPPTPAQVVVVNMQDNLMPTYLKVSQQLRQAGLNVITNFEKRQLGKQFQAADKQGIQ
FCVIIGADEAAAQKSSLKDLKSGEQVEVALADLPEEVKRRLT
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaacgacaaaattaacttctcaactcctagcggttttcctgaatttctgcct
agcgaaaagcgcctagaattatatctactagataccatccgtagagtttatgaaagctat
ggatttacacctattgaaactcccgcagttgaacgtttagaagtactacaagctaaaggt
aatcaaggggataatattatttatggtatcgacccaattctgccaccaaaccgccaagca
gaaaaagataaatctggggaaacaggctcagaagccagagccttaaaatttgaccaaact
gtgcctttagcagcttatattgcccgtcacttaaatgaattaacttttccctttgcccgt
tatcaaatggacgtggtttttcgcggagaaagagccaaggatggacgatttcgtcaattt
cgccaatgtgatatcgatgtagttggacgagaaaaactcagcttgctctatgatgctcaa
atgccggcaattatcaccgaaatatttgaagcagttcatattggtgattttttaattcgc
atcaataaccgaaaagttttaacaggatttttccaatctttagatatatcagaaacgcaa
attaaatcttgtattagcattatcgataatctcgaaaaaatcggtgaagctaaagttaaa
ttagagttagagaaagaaggtattaatccagagcaaacacaaaaaatcatagactttatc
aaaatcgatggtagcgttgatgatgtattagataaactcaaacatctctcacaaaccctg
ccagaatcagagcaatttaatctaggtgtcagcgaattagaaacagtaattacaggcgtg
cgtaacttgggagttcctgacaaacgcttttgtattgatttagcgatcgctcgtgggcta
aattactatacaggcacagtttacgaaacaacgctgataggacacgaagctttagggagc
atttgttcgggtggcagatatgaagagttagtcggcacatttatcggtgagaaaatgcca
ggtgtgggtatttccatcggcttaactcgcttaattagccgcttactgaaagcaggtatt
cttaacaccttaccgcctactccagcacaggtagtggtagtaaatatgcaggataacctc
atgccaacttatttaaaagtttcgcaacagttgcgtcaagcaggactgaatgtaattaca
aactttgagaaacgccagttaggtaagcaatttcaagcagcagataaacaaggcattcaa
ttttgtgtcatcatcggtgctgatgaagccgcagcacaaaagtcatccctcaaagactta
aagtctggtgagcaagtagaagtagcactagcagatttaccggaagaagttaaacgcaga
ctaacgtaa
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