Trichormus variabilis: Ava_2282
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Entry
Ava_2282 CDS
T00277
Name
(GenBank) transcriptional regulator, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ava03000
]
Ava_2282
Transcription factors [BR:
ava03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Ava_2282
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
MarR_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ABA21900
UniProt:
Q3MAT6
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Position
2837891..2838841
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AA seq
316 aa
AA seq
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MNSYLDLIHRDSLLNSLSLEHLRIFEAIARHKSFTRAAEELFTTQPSVSRHIKQLTETIG
LPLFKYVDNCIQLTPTGEELLVIYQEIFQYLENFDTKLVDLKDSNQGCLKVSAVTTSKYV
ITNLLQPFCKLYPDIRIALEFTNHEVILTRIQENADDFYILGYPPKKEDIEIKPFLDNPL
VVVAPSNHPFVKQSSISLERLAKEQLIMRERGSETRMAVEMLFAERGIRMPVKLEVSSNN
ATKQAVIEGLGLAVLSIHTLYPELQRNQLSILNVKGFPILQQWQIAYPKKKWLSPIVSTF
LEYLLTEGVRTKSENF
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaacagttacctagatttaatccacagagatagtcttttaaattccttaagcctagag
catctgagaatttttgaggcgatcgcgcgacataaaagtttcacccgtgcagccgaagaa
ttgttcactacccagccttctgtctcacgtcatattaaacaattaacggaaacaattggt
ttgcctctatttaaatatgtagataactgcattcaactgacaccaacaggggaagaatta
ttagttatttaccaggaaatatttcagtatttagaaaattttgatacaaaattagttgat
ttgaaagatagcaatcaaggctgtttaaaagtctcggctgtaacgaccagcaagtatgtt
attactaatttgttgcaaccattttgcaaactttatcctgatattagaattgcccttgag
tttacaaatcatgaagtcatcttaaccagaatacaagaaaatgcagatgacttttatatc
ctggggtatccaccaaaaaaagaagatattgaaatcaagccatttctggataatccttta
gtggtagttgctccatcaaatcatccttttgttaagcaatcatctatttctttggaacgt
ttagctaaagaacaattaatcatgcgagaaagaggctcggaaactcgtatggctgtagaa
atgttatttgctgaacggggaatcagaatgccggttaaattagaggtaagtagtaataat
gcaactaaacaagcagtaattgaaggtttaggtctagcagttttatcaatacatacctta
tatcctgaattacaacgaaatcagctatcaatcttaaatgtaaaggggtttcctattctt
caacaatggcaaatagcttacccgaagaaaaaatggctatctcctattgtgagtactttt
ttagagtacttactaacagaaggagtcagaactaaaagtgagaatttttga
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