Trichormus variabilis: Ava_2311
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Entry
Ava_2311 CDS
T00277
Name
(GenBank) Prolyl-tRNA synthetase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
ava
Trichormus variabilis
Pathway
ava00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Ava_2311
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ava01007
]
Ava_2311
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ava03016
]
Ava_2311
Enzymes [BR:
ava01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
Ava_2311
Amino acid related enzymes [BR:
ava01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Ava_2311
Transfer RNA biogenesis [BR:
ava03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Ava_2311
Prokaryotic type
Ava_2311
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_edit
DUF2518
Motif
Other DBs
NCBI-ProteinID:
ABA21929
UniProt:
Q3MAQ7
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All DBs
Position
2872157..2873971
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AA seq
604 aa
AA seq
DB search
MRLSQMLFVTLRDDPADAEIPSHKLLLRAGYIRRIGSGIYAYLPLMWRVLQKVSQIVREE
MNAAGAQECLLPQLQPSELWKESGRWDTYTKAEGIMFSLIDRREQQLGLGPTHEEVITAI
ARDMIRSYRQLPLHLYQLQTKFRDEIRPRFGLMRGREFIMKDGYSFHVDEDSLKKTYQDM
YQAYSNMLRRAGLAFRPVEADSGAIGGSGSTEFMVLAEAGEDEVLYTDDGKYAANVEKAV
SLPADAEPSQFTAFEKRETPGTETIEKVTQFLKASPTQIVKNVLYQTVYDNGVTVLVLVI
IRGDQEVNEVKLQNELTKLAPNYGAKAIINLTVPSAENQQTWTAKSLPLGYIAPDIADEY
IAANKQIHPKFVRFVDKTAVDLKNFITGANEAGYHVVGANWGEQFPLPEIVVDVRKARPG
DRAIHDSTQILKSARGIEVGHIFQLGTKYSQALGATYTNEQGEEKPLVMGCYGVGVSRLA
QSAVEQSYDKDGIIWPVAIAPYHAIVTIPNINDAQQVEIAERLYTELNQSGVETLLDDRN
ERAGVKFKDADLIGIPYRIVTGRAITNGKVEIVERATRQSQEIPIDEVITTLQQWIKAAI
EQKN
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgtcacaaatgttattcgttacactacgggatgatccggctgatgcggagatt
cctagccataagttgttactacgtgcaggctacattcgtcgcatcggtagcggtatttat
gcgtatctccccctgatgtggcgagtactgcaaaaggtttctcaaattgtgcgggaagaa
atgaacgcggcaggcgcacaagaatgtctgttaccccagttacagccgtcggagttgtgg
aaggagtcgggacgctgggatacttatactaaagccgagggaattatgttttccctaatt
gaccgccgcgaacaacaattagggttagggccgacgcacgaagaagtaattacagcgatc
gctcgtgatatgattcgctcttaccgtcagctacccctacatctatatcaattgcaaacc
aagttccgcgatgaaatacgtccccggtttggtttgatgcgcggacgggaatttattatg
aaggatggctattctttccacgtcgatgaagacagcctgaaaaaaacctaccaagatatg
taccaagcctacagcaatatgctacggcgcgcgggtttagcgtttcgtccggtagaagct
gattctggtgcaattggtggttctggttctacagaatttatggtgttggcggaagctggg
gaagacgaagttctctacaccgatgatgggaaatacgccgctaatgtggaaaaagcggtt
tctttacctgcggatgcggaaccgtcacagtttacagcttttgaaaagcgagaaacacca
ggaacagaaactattgaaaaagttactcaatttctcaaagcttctcctacccagatagtg
aaaaatgttctctaccaaacggtttatgacaatggtgtaacagttttggtactggtaatt
attcgtggtgatcaagaagttaacgaagttaagttacagaatgaattgacgaaattagct
cctaattacggtgcaaaggcaattattaacctcaccgttcccagtgcagaaaaccaacaa
acatggacagcaaaatctttacctttgggctatattgcaccggatattgctgatgagtat
attgctgcaaataaacaaattcatcctaaatttgtccggttcgttgataaaaccgccgtt
gatttaaaaaacttcattacaggtgcaaatgaagctggttatcacgttgtgggtgcgaat
tggggcgaacaatttcccctaccagaaattgttgtagatgtgcgtaaagccaggccaggc
gatcgcgctattcatgactcaacccaaatcttaaaaagtgccagaggaattgaagtcggt
catatcttccaattaggtactaaatattcccaagccttaggcgcaacctataccaatgaa
caaggtgaagaaaaacccctggtgatgggttgctacggtgtgggtgtatcgcggttagcc
caatcagccgtggaacaatcttatgacaaagatggcattatctggcccgtggcgatcgct
ccttatcatgcaattgtgacaattcctaacattaacgatgctcaacaggtagaaattgcg
gaaaggctttacactgaactgaatcaatcaggggtagaaactttattagatgaccgtaat
gaaagagccggagtcaaattcaaagacgctgatctaatcggtattccttacagaattgtt
accggacgagcaattactaacggtaaagttgaaattgtagaaagggcaactcgccaatct
caagaaatccccattgatgaagttattaccacactccagcagtggattaaagccgcaata
gagcagaaaaattaa
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