Trichormus variabilis: Ava_2403
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Entry
Ava_2403 CDS
T00277
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ava03016
]
Ava_2403
Enzymes [BR:
ava01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Ava_2403
Transfer RNA biogenesis [BR:
ava03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Ava_2403
Prokaryotic type
Ava_2403
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
ABA22020
UniProt:
Q3MAG6
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All DBs
Position
2987510..2988547
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AA seq
345 aa
AA seq
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MPSNHATIEDIALNIARKRLENAVQITFLGTSSGVPTRARNVSSVALRLPQRAELWLFDC
GEGTQHQILRSDLKVSQLSRIFITHLHGDHIFGLMGLLASCGLAGNVQRVDIYGPSGLNE
YIQSASRYSHTHFSYPIKIHTVRPGVIYEDDEFTVTCGLLHHRITAFGYRVAEKDRAGRF
DIEKAKELQIPPGRVYGQLKRGETVTLEDGRVINGAELCGPTEIGRKMAYCTDTIYCDGA
VELAQDADVLIHEATFAHQDSEMAFQRLHSTTTMAAQTALAAGVRRLLMTHFSPRYAPGN
TIELKDLLQEARAIFPRTDMAYDFMTYEVPRRREPILSSVSSSSV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
ttgcccagcaaccatgccactatagaagacatagctttaaacatagcaagaaaaaggcta
gaaaacgctgtgcagattacatttttagggacaagttctggtgtacccacaagagcgcgc
aatgtttccagcgttgcgctgagactaccgcaacgggcagagttgtggttattcgactgt
ggcgaaggtactcaacaccaaattttgcggagtgacttaaaagtcagccaattgtcccga
atatttattacccatctgcatggtgatcacatttttggtttaatgggtcttcttgctagt
tgtggcttggcgggtaatgttcaaagagttgatatttatggcccatcgggtttaaacgag
tatatccaatccgcttctcgttattctcatacacatttctcctatcccattaaaatccat
actgtccgccctggtgtcatatatgaagatgatgaatttaccgtgacttgtggactatta
catcatcgcatcaccgcctttggctatcgcgtagccgaaaaagaccgagccggacgcttt
gatatagaaaaagccaaagaattgcaaatcccacctgggagagtttatggtcaactcaag
cgtggtgaaaccgttacccttgaagatgggcgtgtcattaatggcgctgaattatgcggc
cccacagaaattgggcggaaaatggcctactgcacagacacaatatattgtgatggtgct
gttgagttagctcaggatgcagacgtgttaatccacgaagccacctttgcccatcaagat
tcagaaatggcttttcagcgattacactcaacaaccacaatggcagcgcaaacagcctta
gctgctggagtgcgtcgattactgatgactcacttcagtcctcgctatgcacctggtaac
accatagagttaaaagatttgctacaagaagcccgtgccatctttcctcgtacagatatg
gcctatgattttatgacttatgaagtacccaggcgacgagaaccaattttaagctcagtc
tcctcaagttcggtgtag
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