Trichormus variabilis: Ava_2621
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Entry
Ava_2621 CDS
T00277
Name
(GenBank) Phycobilisome protein
KO
K02092
allophycocyanin alpha subunit
Organism
ava
Trichormus variabilis
Pathway
ava00196
Photosynthesis - antenna proteins
ava01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
Ava_2621
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
ava00194
]
Ava_2621
Photosynthesis proteins [BR:
ava00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Allophycocyanin (AP)
Ava_2621
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Phycobilisome
Motif
Other DBs
NCBI-ProteinID:
ABA22235
UniProt:
Q3M9V1
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All DBs
Position
3244850..3245335
Genome browser
AA seq
161 aa
AA seq
DB search
MSIVTKSIVNADAEARYLSPGELDRIKSFVAGGQQRLRIAQALTDNRERLVKQAGDQLFQ
KRPDVVSPGGNAYGQEMTATCLRDLDYYLRLVTYGIVAGDVTPIEEIGVIGVREMYKSLG
TPIEAVGEGVRALKNAASTLLSAEDAAEAGSYFDYVVGALQ
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcgtcacgaagtccatcgtgaatgctgatgcagaagcccgctacctcagccct
ggcgaattagatcggatcaagagcttcgttgctggtggccaacaacgcctccgcattgct
caagctttgaccgacaaccgcgaacgtttggttaagcaagctggcgaccaattgttccaa
aagcgccctgatgttgtttctcctggtggtaacgcttacggtcaagaaatgacagctacc
tgtctgcgtgacctagactactacctccgtcttgttacctacggaattgttgctggcgac
gttactcctattgaagaaattggtgtaatcggtgttcgtgaaatgtacaagtccctcggc
actcctattgaggcagttggtgaaggcgtacgtgcattgaaaaatgctgcttccaccctt
ctgtctgctgaagatgctgctgaagctggctcttactttgactacgtagtaggtgcgttg
cagtag
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integrated database retrieval system
