Trichormus variabilis: Ava_2723
Help
Entry
Ava_2723 CDS
T00277
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ava
Trichormus variabilis
Pathway
ava00450
Selenocompound metabolism
ava00970
Aminoacyl-tRNA biosynthesis
ava01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Ava_2723
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Ava_2723
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ava01007
]
Ava_2723
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ava03016
]
Ava_2723
Enzymes [BR:
ava01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
Ava_2723
Amino acid related enzymes [BR:
ava01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Ava_2723
Transfer RNA biogenesis [BR:
ava03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Ava_2723
Prokaryotic type
Other AARSs
Ava_2723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
Motif
Other DBs
NCBI-ProteinID:
ABA22336
UniProt:
Q3M9K0
LinkDB
All DBs
Position
complement(3360295..3361887)
Genome browser
AA seq
530 aa
AA seq
DB search
MNLVNKSEKTFALTTPLYYVNDVPHIGSAYTTMAADAVARFQKLLGRDVLLITGTDEHGQ
KIQRSAESLGKAPQEFCDEIVPSFMSLWQLLNIQYDRFSRTTAVRHKAIVDEFFARVWQA
GDIYQGQQKGWYCVSCEEFKEERELLEGNRCPIHVNKEVEWRDEQNYFFRLSKYQTQLEE
FYKSHPDFIQPESRRNEVLNFVSQGLQDFSISRVNLDWGFPVPTDSKHTLYVWFDALLAY
VTALLDPQDEPTLENALAKWWPINLHLIGKDILRFHAVYWPAMLLSAGLPLPDRVFGHGF
LTKDGQKMGKSLGNTIDPVGLVQQYGSDAVRYYFLKEIEFGKDGDFNEVRFINVLNADLA
NDLGNLLNRTLNMVKKYCANYALSITNEDIPAENTLKALGVDLGAKVKQAYEVLAFNQAC
GVVLSLVQASNKFIDDQAPWSLYKQGRQQEVETVLYTVLESVRLAAYLLSPVIPNISSSI
YQQLGFGINFNEQTDITPFAIHAQWGLLSNKQQLGQPQPIFKRIEQTKNV
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaatctagtgaataaatcagaaaaaacatttgcactgacaacacctctgtattatgta
aacgatgttcctcacattggcagtgcctacacaacaatggccgcagacgcagtggcgagg
tttcagaagctattagggcgtgatgtgctgctgataacaggtacagatgagcatggacaa
aaaattcagcgttcagccgagagtttaggaaaagcaccacaagagttttgtgacgaaatt
gtccccagctttatgagtttgtggcaattgttgaatattcaatacgatcgcttcagtcga
actacggctgtccgtcacaaagccattgtagacgaattttttgcacgggtgtggcaggct
ggcgacatctaccaaggacagcaaaaaggctggtattgtgtatcttgtgaagaatttaaa
gaagaaagggaactgctagaaggaaatcgttgccctattcatgttaataaagaagttgag
tggcgagacgaacaaaactactttttccgtctctcaaaatatcaaactcaattagaagag
ttttacaagtctcatccagattttatccagccggaaagccgacgtaatgaagtcctcaac
tttgttagccaaggtttgcaagacttttccatttcgcgggtaaatctagattggggtttt
ccagtacccacagattcaaagcataccttatatgtttggttcgatgctttgctagcttat
gtcacagcattgttagatccacaagacgaaccaaccttagaaaatgccctagcaaaatgg
tggccaatcaacttgcacctcattggtaaggatatcttacgttttcatgctgtttactgg
ccagcaatgctgttatctgctggcttacctttaccagatagagtttttggacatggcttt
ttgactaaagatggtcaaaaaatgggcaaaagtctaggtaatactatagatcctgtagga
ctagtccagcagtatggtagtgatgcagttcgttattacttccttaaggaaatcgaattt
ggcaaagatggcgactttaatgaagttagattcatcaatgtgctgaatgcagatttggca
aatgacttaggtaatttgctcaatcgcaccctgaacatggtgaaaaaatactgcgctaat
tatgcgttatcaattaccaatgaagatattcctgcggaaaatacgttgaaagcattgggt
gtagatttaggagcaaaggtcaaacaagcttacgaagtgttagcttttaatcaagcttgt
ggggtcgtgctttcactggtgcaagccagtaataagtttatcgatgatcaagccccttgg
tcgttatataaacaaggccgacagcaggaagtagaaacagtactgtacactgttttagaa
tctgtgagacttgccgcctatcttctttctccagtgattcccaacataagtagcagtatt
tatcagcaactgggctttgggatcaactttaatgaacaaactgatattactccttttgcg
attcatgcacaatggggtttgctatctaataaacagcagttgggtcaaccccaacccatt
tttaaacgcatagaacaaacaaaaaacgtttaa
DBGET
integrated database retrieval system
