Trichormus variabilis: Ava_2820
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Entry
Ava_2820 CDS
T00277
Name
(GenBank) Holliday junction DNA helicase subunit RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
ava
Trichormus variabilis
Pathway
ava03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ava_2820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ava03400
]
Ava_2820
DNA repair and recombination proteins [BR:
ava03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Ava_2820
RecFOR pathway proteins
Ava_2820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ABA22433
UniProt:
Q3M9A3
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All DBs
Position
complement(3492003..3492644)
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AA seq
213 aa
AA seq
DB search
MISYLKGIVAGIQNVGSNRVILTLEVNGMGYDLQIPQRLAKQLPTTGDLVQIFTHYQVRE
EIPLLYGFSSPAERDLFRHLLSVSGVGAASAIALLDTLELPDLVQAIIAANVQILIQAPG
VGKKIADRICLELKAKLIEWRKSAGFFVATEGPAPGILEEVQMTLFALGYTAHEVSHALH
VVSEDIGLPKDAYVEDWIKQAIAHLSSSEQVSH
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgattagctatctcaaaggtatagtcgctggtattcaaaacgtaggcagcaatcgcgtc
attctcactctcgaagtgaatggtatgggctatgatttgcaaattccccaacggttagca
aagcaattacccacaaccggagatttggtgcaaatatttacccattaccaagtccgggaa
gaaatacccttgctttatggtttttcttccccagccgaacgggatttattccgccacctc
ttgtctgttagtggcgtgggtgcagccagcgcgatcgccctcttggacactttggaacta
cccgatttagtccaagccatcatcgccgctaatgtccaaatcttaattcaagccccagga
gtgggtaaaaaaatcgctgaccgcatttgtttggaactcaaagccaaattaatcgagtgg
cgcaaatcagcaggcttcttcgtcgctaccgaaggcccagcccccggcattctcgaagaa
gtgcaaatgactttattcgctctgggttacaccgcccatgaagttagtcacgccctacac
gtagtcagcgaagatattggtttaccaaaagatgcctacgtagaagactggattaaacaa
gcgatcgcccacctcagtagtagtgagcaagttagtcattag
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