Trichormus variabilis: Ava_2858
Help
Entry
Ava_2858 CDS
T00277
Name
(GenBank) Secretion protein HlyD
KO
K02005
HlyD family secretion protein
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
Ava_2858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
HlyD_2
Biotin_lipoyl
Peptidase_M23
DUF1090
Motif
Other DBs
NCBI-ProteinID:
ABA22471
UniProt:
Q3M965
LinkDB
All DBs
Position
3549614..3551167
Genome browser
AA seq
517 aa
AA seq
DB search
MTTETTHPVDSSILLPQTKKKAKINWLSWLIVLGIVGGIGYAIYYQLTVVPRQQARSRVL
TQAVERQTLPITVSANGTVKPERSVNLSPKNSGILKQLLVKEGDVVKQGQVLAYMDDSNL
RGQLISAQGQLAQAEANLQKVQAGNRPQDIGQSQAQLDEALANLRKLETGNRPQDIAQAQ
ARLKSAQASLTQAEDDLRRNQQLYNDGAIALQVVNQKRTERDSAQAQVNEAQQALALQQA
GSRQEDIEQARATVRQRQEALALLKAGNRREDIDAARAQVTSARGSLQNTQAQINDTVLR
APFDGIVTQKYADPGAFVTPTTSGSAVSSATSSSILALASRNEVVANLSESNIAKIRLGQ
KVTITADAYPGRTFEGKVSQIAAQATVEQNVTSFQVKVSLSDSQRLLRSGMNVSAEFQAG
QLDNALVVPTAAVVRRENATGVFVSGANNRPVFTPIKTGATVNSFTEVQSGLKGNERVLL
SFPPGMRPQSTPRGGVFPGVGGGGGRSSGGRSRNAAP
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgagacaacacaccccgtagattcatcaatattgctgccacagaccaagaaa
aaagctaaaatcaattggctttcttggctgattgtcttagggattgtgggtggtatcggc
tacgcaatttattaccaattaacagtagttcctcgtcagcaagctagaagcagggtactt
acacaggctgtagaaaggcagactctaccaattacagtttccgcaaatggaaccgtcaaa
cctgaacggtcagtcaacctcagcccgaagaattctggcatactcaaacaattgctagtc
aaggaaggggatgttgttaaacaagggcaagttttagcctacatggatgattccaacttg
cgaggacaactgatctctgcacaggggcagttagctcaagctgaggcaaacttgcaaaag
gtacaagcggggaatcgtcctcaggatatcggtcaatctcaggctcagttagatgaagcc
ttggcaaacttacgtaagctagagacaggtaatcgaccacaggatattgctcaagcccaa
gcacgcttaaaaagcgcacaagccagcttaactcaagcagaagacgatttacgccggaat
cagcaactttataatgacggggcgatcgctctacaagtcgtcaatcaaaaacgtacagaa
cgcgatagcgctcaagcccaagtcaatgaagcccagcaagcattggccttacaacaagcc
ggctcacgccaagaagacatcgagcaagcaagggcgacagtcagacagagacaggaagcc
ttggcgctgctaaaagcggggaaccgccgagaagatattgatgcagccagagcgcaggta
acatctgcccgtggttccctacaaaatacccaagcgcaaatcaatgacaccgtactgcgt
gcgccatttgatggtattgtgacccaaaaatacgctgatccaggcgcttttgttacaccc
acaacctcaggaagtgctgtttcttccgccacctcttcttcaattttggcgttagcctca
cgtaatgaagttgtagccaatttatctgaatcgaatattgccaaaatccggttaggtcaa
aaagtgacaattaccgcagatgcctatccaggtagaacctttgaaggtaaagtcagtcag
attgctgctcaagccacagtagagcagaatgtcaccagttttcaggtcaaagtatcattg
agcgattctcaaagattattgcgatcggggatgaatgtgtcagcagaattccaagctggt
caattagataatgctttagtagtacccacagccgcagttgtgcgccgggaaaatgccaca
ggtgtttttgtctcaggagccaataaccgaccagtttttactccgattaaaactggagcg
actgttaatagttttactgaagtccaatctggcttgaaaggtaacgaaagagtcctgctc
agtttccctccaggaatgcgaccccaatcaacaccaagaggaggagtttttccaggggta
ggcggcggtggtggtcgttcttccggtggtcgttcgcgtaacgctgcaccttaa
DBGET
integrated database retrieval system
