Trichormus variabilis: Ava_2909
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Entry
Ava_2909 CDS
T00277
Name
(GenBank) Polysaccharide export protein
KO
K01991
polysaccharide biosynthesis/export protein
Organism
ava
Trichormus variabilis
Pathway
ava02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ava_2909
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_2909
Transporters [BR:
ava02000
]
Other transporters
Pores ion channels [TC:
1
]
Ava_2909
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Poly_export
SLBB_2
SLBB
Motif
Other DBs
NCBI-ProteinID:
ABA22520
UniProt:
Q3M916
LinkDB
All DBs
Position
complement(3615524..3616864)
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AA seq
446 aa
AA seq
DB search
MLIVFNDYMRAFCALSLVSIQVGVFLATPFQPVIAQTLPPSGQLFPTPPPETEAVPQNPN
NETSPQFTRYLLGSGDVINVTFQRPPGAYRLGPGDAVSVVVQRFPDLSFQAAINPEGNII
VPLLETVPLQGLTLLEAQEKIRSLLNRFVINPVVVLSLSSQRPDASFQAQVNAEGNIVVP
QVGIVSVQGLSLEEAQEKIRLSLSQILNDPLFVVTLANPRPVQISISGEVFRPGIYNLNA
ALPRIGDALQVAGGSTIGADLRQVQVRRRLVDGSAISQTIDLYAALQNDGSIPSLRLQDG
DALIIPRREIGTDDGYDRNLVARSTLATPQIRVRVLNYAAGGLVTQALPNGSTFIDALGG
INLDTANVRDIALVRFDPERGKAVTQRLDGKKALEGDVSQNVPLQDNDVIVVGRNLIGRI
TNFLSTITQPFFNVRSFLNFFDTFSR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgttaatagttttcaatgattatatgcgtgcattctgcgctttatcccttgtaagtata
caggtaggggttttcttggctacgccctttcagcctgtaattgctcaaactttacctcct
tctgggcaactatttcctacacctccaccagagacggaagctgtaccccagaatccaaat
aacgaaacttctccccaatttacccgttacttattgggatcgggtgatgtaatcaatgtc
acatttcaacgcccacctggtgcttaccgcttggggccgggagatgcagttagcgttgtt
gtccaacgctttccagatttgagttttcaagcagcaattaatccagaaggcaatatcata
gtgccgctactggagactgttcccctacaaggtttaaccttgctagaagcacaagaaaag
attcgctctttgctgaatcgttttgtgattaatcctgtagtagttttatctttgtcttca
cagcgtccagatgcaagttttcaagcccaagtgaatgcagaaggcaatattgtcgttccc
caggtaggaattgtatctgtacaaggcttaagtttggaagaagcacaagaaaaaatccgt
ttgagtttgagccagattcttaatgatccgctttttgtcgtcaccctagctaacccgcgt
ccagtacaaattagtattagtggagaggttttcagaccaggtatttataacttgaatgct
gcactaccccgaattggggatgcgttgcaagtagcgggtggttccaccattggcgcagat
ttgcgccaagtgcaagtacgtcggcgattagttgatggttcggcaatttcgcaaaccatt
gatttatatgccgcattacaaaatgatggctcaatacctagtttacgtttgcaagatggc
gatgcgttaattattccccgccgcgaaatcggcacagacgacggttatgaccgcaattta
gtagcccgttcaaccttggcgacaccacaaattagagtccgggtattgaactatgctgct
ggtggtcttgtaactcaagctttgcctaatgggagtacttttatagatgcactaggtgga
attaatcttgatactgctaacgttagggatattgctttagtccgttttgacccggaacgt
ggcaaggcagttacacaaagactagatgggaaaaaggctttagaaggcgatgtatctcag
aatgtgccactacaagataatgatgttattgtagttggacgaaacttgattggcaggatt
acaaatttcctcagtactattacccaaccattctttaatgtccgctcatttctcaacttc
tttgatacctttagtcggtag
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