Trichormus variabilis: Ava_2929
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Entry
Ava_2929 CDS
T00277
Name
(GenBank) PBS lyase HEAT-like repeat protein
KO
K02632
phycoerythrocyanin alpha-cysteine-84 phycoviolobilin lyase/isomerase subunit PecF [EC:
4.4.1.31
]
Organism
ava
Trichormus variabilis
Pathway
ava00196
Photosynthesis - antenna proteins
ava01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
Ava_2929
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
ava00194
]
Ava_2929
Enzymes [BR:
ava01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.31 phycoerythrocyanin alpha-cysteine-84 phycoviolobilin lyase/isomerase
Ava_2929
Photosynthesis proteins [BR:
ava00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycoerythrocyanin (PEC)
Ava_2929
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT_PBS
TOR1L1_N
Motif
Other DBs
NCBI-ProteinID:
ABA22540
UniProt:
Q3M8Z6
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All DBs
Position
3635012..3635653
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AA seq
213 aa
AA seq
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MNQASFSVQINSNGTPEEAMPTVSYANPTIHSTAADATRDAAAITTLIAAFHHHHPAVRS
AAVDELIKLGSITVNLLIAAYDDSQDQGFQAQIIQVLAQIGDAKALNLLAEVVGTSVANH
CQGNVRRIAARGLGKIASTTSNPEIINNAQEKLIWALLTPEDWGLRYAAAVSLQEIATPK
AKAALQQAIAQETDPVVRTRMAIALSEEARERN
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagcctcatttagcgtacaaatcaatagcaatggaaccccggaagaagcgatg
cctacggtaagctacgctaatcctaccattcactctacggctgccgatgcaacacgagat
gccgccgctattaccaccttaatcgcagcatttcatcatcaccatcctgctgttagaagt
gcggctgtagatgaattaatcaaattgggaagcatcacagtgaatttgttaattgctgct
tatgatgattctcaagatcaaggttttcaagcccaaatcattcaagttttagctcaaatt
ggtgatgcaaaggcgctaaacttattagccgaggtagtggggacaagtgtagctaatcac
tgtcaaggtaatgtccgccgcattgctgcaagagggttaggcaaaatcgccagcaccacc
agcaatccagaaattatcaataatgcccaagaaaagttaatctgggcattacttaccccc
gaagattggggtctacgttatgctgctgcggtctctttacaagaaattgccacgccaaaa
gctaaagctgctttacaacaagcgatcgcccaagaaactgatcccgttgttcgcacacgt
atggcgatcgctttgagtgaggaagcaagggagaggaactga
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