Trichormus variabilis: Ava_2932
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Entry
Ava_2932 CDS
T00277
Name
(GenBank) CpcD phycobilisome linker-like protein
KO
K02286
phycocyanin-associated rod linker protein
Organism
ava
Trichormus variabilis
Pathway
ava00196
Photosynthesis - antenna proteins
ava01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
Ava_2932
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
ava00194
]
Ava_2932
Photosynthesis proteins [BR:
ava00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
Ava_2932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBS_linker_poly
CpcD
Motif
Other DBs
NCBI-ProteinID:
ABA22543
UniProt:
Q3M8Z3
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All DBs
Position
3637453..3638313
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AA seq
286 aa
AA seq
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MAITAAASRLGTEPFSDAPKVELRPKASREEVELVIRAVYRHVLGNDYILASERLVSAES
LLRDGNLTVREFVRSVAKSELYKKKFFYNSFQTRLIELNYKHLLGRAPYDESEVVYHLDL
YQNKGYDAEIDSYIDSWEYQSNFGDNVVPYYRGFETQVGQKTAGFNRIFRLYRGYANSDR
AQVEGTRSRLAQELASNKASTIVGPSGSNDSWGFRASADVAPKRNLGNAVGEGDRVYRLE
VTGIRSPGYPSVRRSSTVFIVPYERLSDKIQQVHKQGGKIVSVTSA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcaattacagcagcagcatctaggctgggaacagagccttttagcgacgcacctaaa
gtagaattacgccccaaagctagcagagaagaagtagagttagtaattcgcgccgtctat
cggcacgttttgggcaatgattacatactggcatcagagcgccttgtaagtgcagagtct
ctattgagagatggcaatctgacagtacgtgaatttgtgcgtagcgttgctaaatcagaa
ctctacaaaaagaaatttttctacaacagcttccaaactcggctaatcgaacttaactac
aaacacctgttgggtcgcgcgccttatgatgagtcagaagttgtttaccacttggacttg
taccaaaacaaaggttacgatgccgaaatagactcctacatagattcatgggagtatcaa
agcaacttcggtgataacgtcgttccttactaccgtggttttgagactcaagtaggacag
aaaaccgcaggttttaaccggattttccgtttataccgtggttatgctaacagtgatcgc
gctcaagtagaaggtactaggtctcgattagcgcaggaattagctagcaacaaagcttct
acaatcgtggggccatctggaagtaatgatagttggggtttccgggcttcagcagatgta
gctcccaagagaaacttgggtaatgccgtaggtgaaggcgatcgcgtatatcgactagaa
gttaccggaatccgtagtcctggctaccccagtgtacgacggagtagcacggtattcata
gtaccttacgagcgactctctgacaagatccagcaagttcacaagcaaggtggcaaaatc
gttagcgtcacctctgcgtaa
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