Trichormus variabilis: Ava_2935
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Entry
Ava_2935 CDS
T00277
Name
(GenBank) PBS lyase HEAT-like repeat protein
KO
K02289
phycocyanobilin lyase subunit beta [EC:
4.4.1.32
]
Organism
ava
Trichormus variabilis
Pathway
ava00196
Photosynthesis - antenna proteins
ava01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
Ava_2935
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
ava00194
]
Ava_2935
Enzymes [BR:
ava01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.32 C-phycocyanin alpha-cysteine-84 phycocyanobilin lyase
Ava_2935
Photosynthesis proteins [BR:
ava00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
Ava_2935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
HEAT_PBS
Motif
Other DBs
NCBI-ProteinID:
ABA22546
UniProt:
Q3M8Z0
LinkDB
All DBs
Position
3639625..3640227
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AA seq
200 aa
AA seq
DB search
MTDELINGVALADTPEKLVKAVQELALAKDVAAIPTLIAVFGYNNPTAAAIASTALVQMG
EVAVPHLLTQIDDYNYGARAYSIRTLAAIADPRALDVLIDAAATDFAPSVRRAAAKGLGN
LHWHKLDFPDNQTAPKKALETLLFISQDAEWSIRYAAIVGLQGLVNIPDLQQPIHTRLKE
MLVTDTEKAVRARILLAQSQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgaactaattaatggcgttgctctggcggatacaccagagaaactggtaaaa
gcagtacaggaattggcactagccaaagatgtagctgcaattcccactttaatagctgtg
tttggttataacaacccaacggcagcagcaatcgcctctactgccttggtgcagatggga
gaagtagcagtcccccatttactcactcaaatagatgactataactatggcgcacgggct
tattcgattcgcacactcgcggcgatcgctgatccccgtgctttagatgtattaatcgat
gctgctgctacagactttgctcctagtgtccgccgggctgcggctaaaggattagggaac
ttacattggcacaagctagattttcccgacaaccaaacagcacccaaaaaagccttggaa
acactgctgtttatttctcaagatgcagaatggtcgattcgctatgcagcgatcgtcggt
ctgcaaggtttagtaaacatacccgatttacaacagcccatccatactagactcaaagaa
atgctggtaactgataccgaaaaggcagtccgcgcccgcattctattggctcaaagtcaa
tag
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