Trichormus variabilis: Ava_2936
Help
Entry
Ava_2936 CDS
T00277
Name
(GenBank) Phycobilisome linker polypeptide
KO
K02290
phycobilisome rod-core linker protein
Organism
ava
Trichormus variabilis
Pathway
ava00196
Photosynthesis - antenna proteins
ava01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
Ava_2936
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
ava00194
]
Ava_2936
Photosynthesis proteins [BR:
ava00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycocyanin (PC)
Ava_2936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBS_linker_poly
Motif
Other DBs
NCBI-ProteinID:
ABA22547
UniProt:
Q3M8Y9
LinkDB
All DBs
Position
3640264..3641103
Genome browser
AA seq
279 aa
AA seq
DB search
MSIPLLEYAPSSQNQRVEGYEVPNEDTPTIYRLAAAIDDADVDAIIWAAYRQIFSEHLII
KSNRQSFLESQLRNRAINVRDFIRGLGKSEVYRTQVAELNSNYRLVDITLKRFLGRAAYN
QDEEIAWSIVIGTQGLHGFIDALLDSDEYRENFGDDIVPYQRRRYKDRPFNLVNPRYNAY
WRDRQTLTALGGRSFYNARTSGTLTKDDIRRAIPANFMALAGKILTPERNYQRTIASVTS
QIKDIKIPDTSREVTTPEVTVKPVAVALPYRYIPGNKTT
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatacctctgctggaatatgcaccttcttcacaaaaccaacgtgtagaaggttac
gaagtaccaaacgaagataccccaactatttatcggttagctgcggcgatcgatgatgcc
gatgttgatgccattatttgggcagcatatcggcaaattttcagcgaacacctgattatt
aaaagcaatcgtcaatccttcttagaatctcaactacggaaccgggcaatcaacgtccgt
gattttatccggggattgggcaaatcagaagtttaccgcacccaggtagcagaactcaac
tccaactaccgtttagttgacatcaccttaaagcggtttttgggacgtgcagcttataac
caagatgaagaaatcgcttggtcaattgtcattggcactcagggtttacatggttttatt
gatgctctgttagacagcgacgagtatagagaaaacttcggtgatgacatcgtaccctac
caacgccgacgctataaagacagaccctttaacctagttaacccccggtataacgcatat
tggcgcgatcgccaaaccctcaccgccctgggaggacgttccttctacaacgcccgtact
tctggcactttaacaaaagacgatattcgtcgcgccattcccgccaacttcatggcattg
gcaggtaaaatcctcaccccagaacggaactaccagcgcaccatcgcttccgtcacctcc
caaattaaagatataaaaattcctgacaccagccgcgaagtaacaacccccgaagtcacc
gttaaaccagtggccgtagctttgccatatcgttatatccctggtaacaagaccacttga
DBGET
integrated database retrieval system
