Trichormus variabilis: Ava_2959
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Entry
Ava_2959 CDS
T00277
Name
(GenBank) Substrate-binding region of ABC-type glycine betaine transport system
KO
K05845
osmoprotectant transport system substrate-binding protein
Organism
ava
Trichormus variabilis
Pathway
ava02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ava_2959
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_2959
Transporters [BR:
ava02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Osmoprotectant transporter
Ava_2959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
ABA22570
UniProt:
Q3M8W6
LinkDB
All DBs
Position
complement(3667211..3668119)
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AA seq
302 aa
AA seq
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MKRFLIFFLLSLTLVLAIASCSPSTNTTNGDIIIASKDFTEQDILGEILAQQIEETTSLK
VARRPRLGGSFVCHNAILAGKIDAYIEYTGTAFTGILKQPVINNPQVVYEKLKQAYSQRF
QLEVMPSLGFENTFAIIVRGEDARRYNIQTLTDAAQYTPQWRGGFGYEFLEREDGFPGLA
KTYGLKFTKPPQIMDLGLIYRALIQKQVDMVAGNSTDGQIARLGLVVLKDDQQYFPPYEA
TPIVRQETLKKYPQLKTAIAQLTGKIAADEMRQLNYLVEGELQDIKEVAREFRKSKGLIK
TL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatttttaatatttttcttattatctttgactttggtgctggcgatcgctagt
tgtagtcccagcacaaatacaactaatggcgatattattatcgcctcaaaagactttacg
gaacaagatattctaggtgaaattttagcacagcaaattgaagagactactagcttaaaa
gtagctcgccgtccgcgattgggtggctcttttgtttgtcataatgcgattcttgctggc
aagatagatgcttatattgaatatactggcaccgcttttactggtatattaaaacaacca
gtaattaataatcctcaagtagtttacgagaagctaaaacaagcttatagtcaacggttt
caactagaggtaatgcctagcttaggttttgaaaatacatttgccatcattgttcgaggt
gaagatgcgaggcgctataacatccaaactctcacagacgcggctcaatatacaccccaa
tggcgcggtggctttggctatgaatttttagaacgagaggatggttttcctgggttagcc
aagacttacggtttaaagtttactaaaccaccacaaattatggacttgggtttaatatat
cgtgccttgattcaaaaacaagttgatatggtagcgggtaactcgacagatggacaaatt
gctcgtttgggtttagtagttctcaaagatgatcaacaatactttcctccgtacgaagca
acaccaattgtcagacaagaaaccttaaaaaaatatccccaattaaaaacagcgatcgcg
caattaactggtaaaattgctgctgatgaaatgcgacaactcaattatttagttgaaggc
gaattacaggacataaaagaagtagcaagggagttccgtaaatccaaaggactcatcaaa
actctctaa
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