Trichormus variabilis: Ava_3042
Help
Entry
Ava_3042 CDS
T00277
Name
(GenBank) carbohydrate ABC transporter substrate-binding protein, CUT1 family
KO
K02027
multiple sugar transport system substrate-binding protein
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_3042
Transporters [BR:
ava02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative multiple sugar transporter
Ava_3042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SBP_bac_6
SBP_bac_11
SoxE_N
Motif
Other DBs
NCBI-ProteinID:
ABA22652
UniProt:
Q3M8N4
LinkDB
All DBs
Position
3765632..3766852
Genome browser
AA seq
406 aa
AA seq
DB search
MAIAIAIVAYHSWQIQSSPSASAPVTVKLSGWGGSPVEQKLLKQVLQDFEAQHPLIKVKY
EVISDQYMDVIKTRLIGEAAPDVFYLDALEAPFLMSQNVLEPLESYITPAFDLSDFETNL
LDSFKYQNHIYGFPKDYSTLALFYNKKAFAAAGLSSPPATWQELRTYSRKLTGKLNKYGF
GEAPELARQVYKIKAFGGEVINQNGHATFASEAGLRGLQLVIDQYQKDKSSAQKSDVGTN
SGSEMFGQEKVAMVIEGNWAIPYLQETFPQLEFATAQLPTINQKKGTMVFTVAYVMSKQS
QHKAEAWELISYLTGKAGMQKWTSTGFALPTRKSVSQKLGYEQDPLRSPLVAGVDDATPW
QVGKYPAPIVNNFDNQFVSALLGQQPLKQAMLRAQNQANKQIQAME
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgcgatcgccattgttgcttaccatagttggcaaatacagagttcgccttca
gcatctgccccagtcactgttaaactcagtggctggggtggttctccggttgagcaaaaa
ctattgaaacaggttttacaagactttgaagcacagcatcctctgatcaaggtcaaatac
gaggtgatttctgaccaatacatggacgtgatcaaaacccgcttgattggagaagctgcc
cctgatgtcttctacttggatgctctggaggctccttttttgatgagccagaatgtgctg
gaaccattagaaagttacatcactcccgcatttgacttaagtgactttgaaaccaatctc
ctagatagctttaaataccagaaccatatttacggtttccctaaggactattccactttg
gcgctgttttataacaaaaaagcctttgctgctgctggtttgagcagcccccctgcgaca
tggcaagaattacgcacctactcccgaaaattaacaggtaaactcaacaagtatggcttt
ggggaagcaccggaattagctcgccaagtttacaaaattaaagcttttggtggagaagtt
atcaatcaaaatggtcatgctacctttgcgagtgaagctggtttacggggattgcaatta
gtgatagaccagtatcaaaaagataaatcatctgctcaaaaatctgacgtagggacaaac
tcaggtagcgaaatgtttggtcaggagaaagtggcaatggtaattgaaggtaattgggca
attccatacttacaagaaacctttccgcaattggagtttgcaactgcacaattaccaacg
attaatcaaaaaaaaggcacaatggtattcactgttgcctatgtcatgagtaagcaatca
cagcataaagctgaagcatgggagttaatttcctatctcacaggtaaagccggaatgcag
aaatggacaagtacaggctttgctttacctacacgcaaatcagtatcccaaaaactagga
tatgagcaagatcccttgcgatcgcctttagttgccggtgttgatgatgctacaccctgg
caggttggtaaatacccagccccaattgtgaacaattttgataatcaatttgtcagtgcc
ttactaggacaacaaccattaaaacaggcgatgctcagggcgcagaatcaggcaaataag
caaattcaagcaatggagtga
DBGET
integrated database retrieval system
