Trichormus variabilis: Ava_3088
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Entry
Ava_3088 CDS
T00277
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ava
Trichormus variabilis
Pathway
ava00300
Lysine biosynthesis
ava00470
D-Amino acid metabolism
ava01100
Metabolic pathways
ava01110
Biosynthesis of secondary metabolites
ava01120
Microbial metabolism in diverse environments
ava01230
Biosynthesis of amino acids
Module
ava_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Ava_3088
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Ava_3088
Enzymes [BR:
ava01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Ava_3088
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ABA22697
UniProt:
Q3M8I9
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Position
3838451..3839299
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AA seq
282 aa
AA seq
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MGKMAIEFTKYHGLGNDFILIDNRASKTPAITPEKAVEMCDRHFGIGADGVIFALPGENG
TDYTMRIFNSDGSEPEMCGNGIRCLAAFLADLEGLSRNKDTYRIHTLAGVITPQLTPDGQ
IKVDMGLPRLLAGEIPTNIAAADQKVINQPLEVEGKTWEVTCVSMGNPHCITFVEDVAAI
PLETIGPKFEHHPAFPQRTNTEFIQVVSRDYLKMRVWERGAGITLACGTGACASLVAAVL
TGRSDRLATVELPGGPLEIEWSEVDQRIYMTGPADRVFTGKL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaatggcaatcgaatttactaagtatcacggtctaggcaacgattttattctc
atcgataatcgcgcttctaaaacgccggcaatcactccagagaaagcggtggagatgtgc
gatcgccactttggtatcggtgctgatggtgtaatttttgccttacctggagaaaacggt
actgattacaccatgcggatttttaattccgatggttcagaaccggaaatgtgtggtaat
ggtattcgctgtctcgctgcatttctggctgatttggaagggctttctcgtaataaggat
acctatcgtattcatactttagctggtgtgattaccccccaactcacccctgatggacaa
atcaaggtggatatgggtttacctcggttactagctggggaaattccgacaaatattgct
gctgctgatcagaaagtaattaaccaacccctagaagtagaagggaaaacttgggaagtt
acttgtgtcagcatggggaatccccactgtattactttcgtggaagacgtggcagcgatt
cctttagaaaccatcggccctaaatttgaacatcacccagcttttcctcaacggacaaac
accgaatttattcaagttgtcagccgtgattacttgaagatgcgtgtctgggaacgcggt
gcaggaattactttagcttgtggtacaggtgcttgtgcttccttggtagcggcggtattg
actggaagaagcgatcgcctcgctactgtagaattgcctggtggccctttggaaattgaa
tggtcagaagtagaccaaagaatttatatgaccggcccagctgatagggtattcacaggt
aaactgtga
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