Trichormus variabilis: Ava_3112
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Entry
Ava_3112 CDS
T00277
Name
(GenBank) FAD dependent oxidoreductase
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
ava
Trichormus variabilis
Pathway
ava00906
Carotenoid biosynthesis
ava01100
Metabolic pathways
ava01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Ava_3112
Enzymes [BR:
ava01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
Ava_3112
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
HI0933_like
FAD_oxidored
Pyr_redox_2
GIDA
Thi4
FAD_binding_3
Pyr_redox
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
ABA22720
UniProt:
Q3M8G6
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Position
3866325..3867845
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AA seq
506 aa
AA seq
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MSVTSTTSQNSLFDVIVIGSGIGGLVTATQLAAKGAKVLVLESYIIPGGSAGYFERQGYR
FDVGASMIFGLGNRGTTNLLTRALQAVNSSVEAIADPVQIHYHLPSNLNLKVDRVYDKFL
QNLAAYFPHETKGIRRFYDECWQVFKCLNRMDLLSLEEPRYLLRTFLQHPLACLGLLKYL
PQNVGDIARRYIRDPELLKFIDIECYCWSVVPAAMTPMINAGMVFSDRHYGGVNYPKGGV
GQIAQKLAEGLEKVGGEIRYQAKVAKIITEKYRAVGVQLTNGEIYRSKRIVSNATRWDTF
EKLLPVDKMPSNEKDWQHSYKKSPSFLSLHMGVKESVLPQGTECHHIILEDWQNMTQAEG
TLFVSIPTLLDPELAPEGCHIIHAFTPHWINDWQGFSVSDYEAKKEETAWRIIDRLEKIF
PGLDAGLDYLEVGTPRTHRRFLGREDGTYGPIPRRKLRGLLSMPFNRTAIKGLYCVGDST
FPGQGLNAVAFSGFACAHRIAVDLGL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtaacctcaactacttcccaaaattctttgtttgatgtcatcgtgattgggtct
ggcattggcggactagtgacagcaacccaactcgccgccaagggagcgaaagttctggta
ctagaaagctatatcattcctggtgggagtgctggctactttgagcgtcaaggctatcga
tttgacgttggggcttccatgattttcggcttagggaacagagggactacaaacttactc
acccgtgctttacaagctgtaaatagtagtgtagaggcgatcgctgatcccgtacaaatc
cattaccacttacccagcaacttaaacctgaaagttgaccgggtttatgataagtttttg
caaaatcttgctgcttactttcctcatgaaacaaaagggattcgtcgcttttatgacgaa
tgttggcaagtgtttaagtgtctcaaccgcatggatttgttgtcattagaagaacctcgg
tatttgctgcgaacgtttttacagcatcctttagcgtgtctaggtttacttaagtatcta
cctcaaaatgtcggagatatcgcccgtcgctacatcagagacccagaattattgaaattt
atcgatatagaatgttactgctggtctgtagtgccagcagcgatgacaccgatgattaat
gcaggtatggtcttttctgacaggcattatggcggtgttaactaccccaaaggtggagta
ggtcaaattgcccaaaaacttgcagagggcttagaaaaagtcggtggtgagattcgatat
caagccaaagtagcaaaaatcattactgaaaaataccgtgctgtcggtgtacaactaact
aatggtgaaatttatcgaagcaaacggatagtttctaatgctacacggtgggacacattt
gaaaaattgctacctgtagataaaatgccatctaatgagaaagattggcaacacagctat
aaaaaatcgcccagttttctgagtttacacatgggggtgaaagagtccgtcttacctcaa
gggacagaatgccatcacattatcttggaagattggcaaaacatgacccaagcagaaggt
acactgtttgtctccatacccacattacttgatccagaattagccccagagggatgccat
ataattcatgcctttacgcctcattggataaatgattggcaagggttttctgtgagtgac
tacgaagcgaagaaagaagagacagcctggcgaattattgaccgactagagaagattttt
cctggtttagatgcgggtttagattatttagaagtaggcacaccccgcacccatcgccgc
tttttaggacgagaagacggcacttatggccccatccccagacgtaaactgcgggggtta
ttgtccatgccctttaatcgcaccgctatcaagggactgtattgtgtgggagacagcaca
tttcccggacagggtttaaatgcagtcgccttttccggcttcgcctgcgcccatcgcatc
gccgtagatttaggactgtga
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