Trichormus variabilis: Ava_3150
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Entry
Ava_3150 CDS
T00277
Name
(GenBank) Lysyl-tRNA synthetase, class-2
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ava
Trichormus variabilis
Pathway
ava00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Ava_3150
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ava01007
]
Ava_3150
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ava03016
]
Ava_3150
Enzymes [BR:
ava01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Ava_3150
Amino acid related enzymes [BR:
ava01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Ava_3150
Transfer RNA biogenesis [BR:
ava03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Ava_3150
Prokaryotic type
Other AARSs
Ava_3150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
KTSC
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ABA22758
UniProt:
Q3M8C8
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All DBs
Position
3912207..3913892
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AA seq
561 aa
AA seq
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MSEEDIRAARLEKVEQLKQLGTNPYAYRWESTHHAAQLQEKFADLTSGEEVDTEVAIAGR
IMARRVFGKLAFFTLEDETGTIQLYLEKNRIQESMAETDADAFNHLKQLTDVGDILGAKG
TIKRTEKGELSIYVKEYTILTKSLLPLPDKWHGLTDVAKRYRQRYVDLIVNPEVRQTFRR
RAQITAGIRRYLEQRDFLEIETPVLQSETGGADARPFITYHNTLEMELYLRIATELHLKR
LIVGGFEKVFELGRVFRNEGISTRHNPEFTSIEIYQAYADYNDMMALTEGIITTVAQDVL
GTLQITYQGETVDLTPPWRRVTMHDLVKEYTGLDFHSFQTLEEAKSASKNAGIPGVDEAQ
TIGKILNLAFEEKVEANLIQPTFVIDYPVEISPLAKPHRSQPGLVERFELFIVGRETANS
FSELTDPIDQRERLEAQAAKKAAGDLEAQGVDEDFLTALEYGMPPTGGLGIGIDRLVMLL
TDSASIRDVIAFPLLKPEGSFIKEYRYESTTQTLTMEFDSGSVYEYFKVPLTVKEELDNA
PSKGQYFHKFIKGKFKYEQLS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagaagatatccgtgccgctaggctggagaaagtagaacaactcaagcagcta
ggaactaacccctacgcttaccgttgggagtctacccatcacgccgcccaattgcaagaa
aaatttgctgatttaaccagtggtgaagaagtcgatacagaagttgccattgccggacgc
attatggcgcgtcgcgttttcggtaaattggctttcttcaccttggaagatgaaacaggc
actattcagctttatttagagaaaaatcgtatccaagaaagcatggcagaaactgatgcc
gatgcttttaatcatctcaaacaactcacagatgtaggagatattctgggagccaaggga
accataaaacggactgaaaagggcgagttatcgatttacgtcaaagaatataccatcctc
accaaatccctactgccgctacccgacaagtggcatgggttaacggatgttgccaagcgc
taccgtcaacgctacgttgatttaattgttaaccccgaagtccgccaaactttccgccgt
cgcgcccaaattacggctgggattcgccgctatttggaacaaagggattttctagagatt
gaaaccccagttttgcaaagtgaaactggtggtgctgatgcgcgtcccttcatcacttac
cacaacaccttagaaatggagttgtatctgcggattgccacagaactccacctcaaacgg
ttgattgtcggtggttttgaaaaagtatttgagttggggcgcgttttccgcaatgaggga
atttctaccagacacaaccctgaatttacctcaattgaaatttaccaagcctacgccgac
tacaacgatatgatggcgctaacagaaggtattatcaccactgttgcccaagatgtactc
ggtacgctgcaaattacctaccaaggcgaaacggtagatttgacaccaccttggcgacgg
gtgacaatgcacgatttagtgaaagaatatacgggcttggatttccattctttccaaaca
ctagaagaagcgaaatcagcaagtaaaaatgctggaattcctggtgtagatgaagcccaa
actataggaaaaatcctgaatttagcatttgaagaaaaggtagaagctaacttaattcag
ccgacctttgtcattgattatcctgtagaaatttcgccattagctaaacctcaccgttct
caacctgggttagtagaaagatttgaattattcatagtcgggcgggagactgcgaatagt
ttctcagaattaacagaccccatcgaccaaagagaacgtttggaagcccaagcagccaaa
aaagccgccggtgacttagaagcccaaggtgtagatgaagatttcttaactgcgttggaa
tatggtatgccacccacaggcggtttaggtattgggattgatcggttagtcatgttatta
actgattctgccagcattcgagatgtaattgctttccctctactcaaacccgaaggcagc
tttattaaggaatatcgctatgagtcaacaactcaaacactgactatggagtttgatagt
ggaagtgtttacgaatatttcaaagtaccgcttactgtcaaggaagaattagataatgca
ccgtctaagggtcaatatttccataagtttattaaagggaaattcaagtatgaacaattg
agttga
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