Trichormus variabilis: Ava_3287
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Entry
Ava_3287 CDS
T00277
Name
(GenBank) Polysaccharide export protein
KO
K01991
polysaccharide biosynthesis/export protein
Organism
ava
Trichormus variabilis
Pathway
ava02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ava_3287
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_3287
Transporters [BR:
ava02000
]
Other transporters
Pores ion channels [TC:
1
]
Ava_3287
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLBB
Poly_export
SLBB_2
DUF5122
Motif
Other DBs
NCBI-ProteinID:
ABA22895
UniProt:
Q3M7Z1
LinkDB
All DBs
Position
4100694..4102172
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AA seq
492 aa
AA seq
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MLNTGSLKFLSQPAVGAALLTAAHLVVPFASVAQGQQVFPNSQTVPPNNQRVSPPVQVDT
KYLLGGGDLIRVNVFEVPEYGGEYQIPPGGAINLPLIGSVSVQGFTTEQAADVITDRYRR
YLKRPQISVNLLSPRPINILVAGEVTRPGSYTLSLQGGAGNNPGVQYPTVLAALTTAQGV
TLAADVTQVKLRRKTSSSTEQIVSLNLKELIQTGSSSQDITLRDGDVIVVPTATSFNVAE
ARNLFAANFAASQTAPRTVAIIGQVNRPGSYLVSAGATEAQAGGTGASGSGLPTVTRAIQ
LAGGITSQADITKIKLRRPTRTNGEQGIDLNLLELLRSGDVNQDVIVQDGDTIVIPTATE
VNPALATELATTTLSPNTIQVGVVGEVKRPGAVDIRPNSSLNQALLAAGGFNDARARSAS
VELIRLNPNGSVTKREVKVDFNQGINEETNPILRNNDVVVVGRSNIARTGDTLNIVAGPL
GIIFNFLRFFGL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacacaggttcgctgaaatttctatcacagccagctgtgggtgcagctttgcta
actgctgctcatctcgttgtgccgtttgccagcgtagctcagggacaacaagtatttcct
aattcgcaaacagtacctcctaataaccaacgagtatcaccaccagtacaagtagataca
aaatacttgttgggaggcggcgatctaattcgtgtaaatgtatttgaagttcccgaatat
ggtggtgaataccaaattcctccaggtggagctatcaacctacctttaatcggcagtgtt
tcagttcaagggttcacgacagaacaagcagccgatgtgatcactgacagatatcgcagg
tatctcaaacgtccccagatttccgtcaatcttttatcccctcgccccatcaatatctta
gttgctggagaagtcacacgcccaggctcttacactttgagcttgcaaggcggtgcaggt
aataatccaggggtacaatatcccactgtattggctgcactcacaacagcccagggtgtt
accttagcagcagatgtcactcaagtgaagctgagacgtaaaaccagtagttctacagag
caaatcgtgagcctaaatttgaaggaactcatccaaactggtagctcttcacaagatatt
actttaagagatggagatgttatagtcgtgccaactgctactagcttcaacgtagcagaa
gcacgtaatttatttgctgctaactttgctgctagccaaacagcaccgcgcacagtagcc
attattggtcaagtcaatcgtcctggctcatatcttgtgagtgcgggggcgacagaagct
caggctggtgggactggggctagtggcagtggtttacccacggtgacacgagcaattcaa
ttagctggcggtattacctcccaagcagatattaccaagatcaaattacgccgacccaca
aggactaatggcgagcaaggtatagacctaaatcttttggaattattacgtagtggtgat
gttaatcaagacgtaattgtccaagatggagacacaattgtcattcctactgctactgag
gttaacccagcactagcgacggaattagcaactactaccttgtcgcctaatacaattcag
gttggtgtggtgggtgaagttaaacgcccaggagccgtagacattagaccaaatagctcc
ttaaaccaagcactactcgcggctggtggatttaatgacgctagagcgcgtagcgccagt
gtggagttgattcgtctcaaccccaatggttcagtgacaaagcgtgaagtaaaagttgac
ttcaaccaaggaattaacgaagagactaatcccatactccggaataatgatgttgtggta
gttggtcgctctaatatagctagaacgggtgatacgctgaatatagtagccggccctctt
ggtataatctttaacttcttaagatttttcggactttaa
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