Trichormus variabilis: Ava_3297
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Entry
Ava_3297 CDS
T00277
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
ava
Trichormus variabilis
Pathway
ava00860
Porphyrin metabolism
ava01100
Metabolic pathways
ava01110
Biosynthesis of secondary metabolites
ava01120
Microbial metabolism in diverse environments
ava01240
Biosynthesis of cofactors
Module
ava_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Ava_3297
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ava04147
]
Ava_3297
Enzymes [BR:
ava01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
Ava_3297
Exosome [BR:
ava04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Ava_3297
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
ABA22905
UniProt:
Q3M7Y1
LinkDB
All DBs
Position
complement(4112359..4113336)
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AA seq
325 aa
AA seq
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MFPTHRPRRLRTHPQLRRMVRETVLTTNDLIYPLFAVPGEGIANEVKSMPGVYQLSVDKI
VEEAKEVYDLGIPAIILFGIPADKDTDATGAWHDCGIVQKAATAVKSAVPDLIVIADTCL
CEYTSHGHCGYLQVGDLTGRVLNDPTLELLKKTAVSQAKAGADIIAPSGMMDGFVQAIRA
GLDEAGFQDTPILSYAAKYASAYYGPFRDAADSTPQFGDRRTYQMDPGNSREAIKEIELD
IAEGADMLMVKPALAYMDIIWRVKEASNLPVAAYNVSGEYSMVKAAALNGWIDEQRVVME
TLTGFKRAGADLILTYHAKDAARWL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacacatcgccctcgtcgtttacgtacccatccccaattacgccgcatggta
cgtgagactgtattgactaccaatgatttgatttacccgttgtttgctgtcccaggtgaa
ggaattgccaatgaagtaaaatctatgcctggagtctatcaactatcggtagataaaatt
gtcgaagaggcaaaagaagtttacgatttaggcattccggcaattattttgtttggtatt
cccgcagataaggatacagatgccacaggtgcttggcatgattgcggtattgtccagaag
gcggcgactgcggtgaaatcagccgtacctgatttaattgtgattgcggatacttgttta
tgtgagtataccagtcacggtcattgcggttatttgcaagtgggtgatttgacaggaaga
gtattaaatgaccctactttagaactattgaagaaaaccgcagtttcccaagccaaagct
ggtgcggatattatcgcgccttccgggatgatggatggctttgtgcaggcaattcgcgct
ggtttagatgaggctggatttcaagacacgccaattttgtcctatgctgctaagtatgct
tcagcttattatggcccatttagggatgcagcagattctacaccacaatttggcgatcgc
agaacctaccaaatggaccctgggaactcccgcgaagccatcaaagaaattgaactagat
attgctgaaggggctgatatgttgatggtgaagccggctttggcttacatggacattatc
tggcgggtgaaggaagccagtaatttacctgtggctgcttacaatgtatctggtgaatat
tcgatggtgaaagctgcggcgctgaatggttggattgatgaacagcgtgtagttatggaa
actctgactgggtttaagcgtgctggtgctgacttgattttaacctatcacgctaaagat
gctgcgcgttggttgtag
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integrated database retrieval system
