Trichormus variabilis: Ava_3556
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Entry
Ava_3556 CDS
T00277
Name
(GenBank) fumarase
KO
K01744
aspartate ammonia-lyase [EC:
4.3.1.1
]
Organism
ava
Trichormus variabilis
Pathway
ava00250
Alanine, aspartate and glutamate metabolism
ava01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Ava_3556
Enzymes [BR:
ava01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.1 aspartate ammonia-lyase
Ava_3556
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Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
HopW1-1
Motif
Other DBs
NCBI-ProteinID:
ABA23162
UniProt:
Q3M774
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All DBs
Position
complement(4425974..4427389)
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AA seq
471 aa
AA seq
DB search
MTTNTDFRIERDSMGDRQIASDVYYGIQTLRAIENFPISGLKPLPTYVDAGLLIKKATAI
VNGELGCIPQDISQAIVQATDEILAGKLRDQFVVDVYQAGAGTSHHMNINEVLANRALEI
LGEEKGNYKRVSPNDHVNYGQSTNDVIPTAIRIGGLLALTKTLQPALEKAIAALEHKAVE
FQDIVKSGRTHLQDAVPVRLGDNFAAWAHILSEHQNRIYTASGDLMVLGLGGSAAGTGLN
THPQYRARVVEVLAELLNLPLQPAPHLMAAMQSMSPFVNVSGAIRNLAQDLAKISHDLRL
MDSGPKTGLKEIQLPPVQPGSSIMPGKYNPVMAEMTSMVCFQVMGYDQAIALAAQAGQLE
LNVMMPLIAYDLIHSIEILGSTIAALTERCIQGITANKERCLAYAEGSLALVTALNTHIG
YLNAADVAKESLNTGKSLRQIVLEKGLMSEAELATVLNLEEMSSILPLQAE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgactacaaatacagattttcgtattgaacgcgattcgatgggcgatcgccaaattgct
agtgatgtttattacggtattcaaactctccgagccattgaaaatttccccattagcggt
cttaagcccttacctacttacgtagatgctggtcttctaattaaaaaagctacagcaatt
gtcaatggagaactaggctgtattccccaagatattagccaagcgattgtgcaagcaacc
gatgaaattctggcagggaagttaagggatcagtttgtcgtggatgtttatcaagccggt
gcagggacatcccaccacatgaatattaacgaagtcttagcaaatcgggctttggaaatt
ctgggtgaagaaaaaggtaattacaaacgagttagccctaatgatcatgtgaactatggg
cagtctaccaacgatgttattcctactgcaattcgcatcggcggcttattggcactgacc
aaaacattacagccagcattagaaaaagcgatcgctgctttagaacacaaagctgtagaa
tttcaagatattgtcaaatccggcagaacccatttacaggatgccgttcccgtccgcttg
ggtgataatttcgccgcttgggcgcatatcctctcagaacatcaaaaccgcatttacacc
gcctctggagacttgatggtactcggtttaggtggtagtgcggcgggaacaggcttaaac
acccatccccaataccgcgcccgtgtggttgaagtattggcagaactactcaacttacca
ctccaacccgcaccccatctcatggctgctatgcagagtatgtccccatttgtgaacgtt
tccggggcaatacgcaacctagcccaggatttagcaaaaatctctcacgatttacggctg
atggactccgggccaaaaactggcttgaaagaaattcaattacccccagtacaacccggt
tcctcaatcatgccaggcaaatataaccccgtcatggcagagatgacatcgatggtgtgt
ttccaggtgatgggttacgatcaggcgatcgctcttgcagcccaagccggacaattagaa
ttaaacgtgatgatgccgttgattgcctatgatttaattcacagcatcgaaattctgggg
tcaactatcgccgccctcacagaacgctgtattcaaggaattaccgccaacaaagaacgg
tgtttagcctacgccgaaggcagtttagctttagttactgccctcaacactcatattggt
tatttaaatgccgcagatgttgccaaagaatctttaaacacaggaaaatctctacggcag
attgtgttagaaaaaggactgatgagcgaagcagagttagccactgtgctaaatctagaa
gaaatgagtagtatattgccactccaggcagagtaa
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