Trichormus variabilis: Ava_3656
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Entry
Ava_3656 CDS
T00277
Name
(GenBank) Twin-arginine translocation pathway signal
KO
K15576
nitrate/nitrite transport system substrate-binding protein
Organism
ava
Trichormus variabilis
Pathway
ava00910
Nitrogen metabolism
ava02010
ABC transporters
Module
ava_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
Ava_3656
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ava_3656
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_3656
Transporters [BR:
ava02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Nitrate/nitrite transporter
Ava_3656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMT1_2
TAT_signal
NMT1
Motif
Other DBs
NCBI-ProteinID:
ABA23262
UniProt:
Q3M6X4
LinkDB
All DBs
Position
4561489..4562772
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AA seq
427 aa
AA seq
DB search
MPKLNRRQFITTAGAAALTHATIAKTQLHSGVYAGYSDTPEVTTATLGFLPVTSCCPLII
AKAKGFFAKHGMPDINVVKQPSWAVMRDKLMLGAADEGLDGGHLLFPMVYLMATGEISYG
RKIPMYILARMNVNGQGISVANSYKNLNLSIDSSPLKSAFAQKTKAGETVRCAVPYRRVT
GDFFMRWWLAYGGIDPDRDLSVIVIAPPQMVASMRSGSMEAFCVVDPWHHRLIKQGLGYS
TVTTGELWPNHPEKAFTVRAEWVDKYPKAAKAMLAAFLEAQIWCDKPENKEELFQIVSQR
QWIGVKSDLIRDRLLGKFDYGNGRIVENSPHAIKYWRENASYPFKSHDLWFLIEDMRWGY
RSPDFDTKPLIDAVNREDLWREAAKFIGQESAIPASTSRGVEKFFNGLEFNPENPLAYLN
APKIRIM
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagttgaacaggcgacaatttatcacaactgcgggtgcagctgcactgactcat
gccactattgccaaaactcagttacattccggcgtttatgctggctatagtgatactcca
gaagtaaccacagccacactgggatttttacctgttactagctgctgtcctttaattatt
gccaaagccaaaggcttttttgctaaacatggaatgcccgatattaatgttgtcaaacaa
ccttcctgggcagtcatgcgcgacaaactcatgttaggtgcagccgatgaggggttagat
ggtgggcatttgctgtttccgatggtgtacctcatggctaccggggaaattagctatggg
cgaaaaatccccatgtatatcttggccagaatgaatgtgaacggacaagggatatcagtt
gctaatagctacaaaaatttaaacctgagtatagatagttctcccttaaaatcagccttt
gcccaaaaaacgaaagctggagaaactgtgcgttgtgcagtaccttatcgtcgggtaacg
ggtgatttttttatgcgttggtggttggcttatggtggaatagatccagaccgtgattta
tcagtaattgtgattgcacctccacagatggttgcgagtatgcgtagtggcagcatggaa
gccttctgtgtagttgacccttggcatcaccgattgattaaacaagggcttggttactca
actgtgacaactggtgagttgtggcctaatcacccagagaaagcctttactgtacgtgct
gagtgggtggataaatatcccaaggcggcaaaagcgatgctggcggcatttttagaggcg
caaatctggtgtgataagccagaaaataaagaggaactattccaaatagtgtcacaacgg
caatggattggcgtgaaaagtgacttgatccgcgatcgcctcttaggtaaatttgattat
ggtaatgggcggatagtggaaaatagcccccatgccatcaaatactggcgggaaaatgct
tcctatcctttcaagagtcatgatttatggtttctcattgaagatatgcgctggggttat
cgttcccccgattttgataccaaacccctaattgatgccgtcaatcgtgaagatttgtgg
cgagaagctgctaagttcataggtcaagagtcagcgattcccgccagtacatcacggggg
gtagaaaaattctttaatggcttagaatttaatccagaaaatcccctagcttatctcaat
gcgcccaagatcaggataatgtga
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