Trichormus variabilis: Ava_3685
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Entry
Ava_3685 CDS
T00277
Name
(GenBank) carbohydrate ABC transporter substrate-binding protein, CUT1 family
KO
K17244
putative chitobiose transport system substrate-binding protein
Organism
ava
Trichormus variabilis
Pathway
ava02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ava_3685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_3685
Transporters [BR:
ava02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative chitobiose transporter
Ava_3685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
ABA23291
UniProt:
Q3M6U5
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All DBs
Position
complement(4592517..4593815)
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AA seq
432 aa
AA seq
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MIQLQKLKKFIACAMLGLITSWMVSCSTGNVNTNTQQTASGTANIEFWTMQLQPQFNNYF
QSLIANFETQNPGIKVNWVDVPWAAMENKILTAVSAKTPPDVVNLNPDFASQLAGRNAWL
DLNTKVPQEARSSYLPNIWKASTLNGKSFGVPWYLTTRLTIYNTDLLKQAGISKPPATYA
ELAQAAQQIKDKTGKYAFFVTFVPQDSGEVLQSFVQMGATLVDTEGKAAFNSPQGKAAFQ
YWVDLYKKGLLPKEALTQGHRHAIDLYQSGETAFLASGPEFLKTIATNAPKIAQASAIAP
QLTGDTGKKNVAVMNIVVPRDTKQPDAAVKFALFVTNDENQLAFAKAANVLPSTTKALAD
SYFKDIPADASTVEKARVVSAQQLQQAEILTPALKDIKKLQKAIYDNLQAAMLGEKTVDK
AVEDASQEWNNR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgattcaattgcaaaaattaaaaaaatttattgcttgtgcaatgctgggtttaatcacc
agttggatggtcagttgcagcacaggaaacgttaatacaaatacacagcaaactgcttcg
ggaacagcaaatattgagttttggactatgcaactccaacctcaatttaataactacttc
caaagtctgattgcgaattttgaaacccaaaatccgggtataaaggtgaactgggtagat
gtaccctgggcggcaatggagaacaaaattttaacagctgtctccgcgaaaacgccacct
gatgttgttaacctcaatccagattttgcttctcaactagcaggacgaaatgcctggtta
gatttgaatacaaaagtcccgcaggaagcacgttcctcctatcttccgaacatttggaaa
gccagtactctgaatggcaaaagttttggcgttccttggtacctcacaacgaggctaacc
atttataacactgatttattaaaacaggcaggtatcagtaaaccacctgctacttacgca
gaattagcacaagcggcgcaacaaattaaagataagacagggaaatacgcgttttttgtg
acgtttgtaccgcaagattccggtgaagtcttacagtcttttgtacagatgggagcaacc
ctagtagatactgaaggcaaagctgcttttaattcaccccaaggaaaagccgcgtttcag
tattgggtagacctttacaaaaaaggcttattaccaaaagaagcactaactcaaggacat
cgccacgcaattgatttatatcaatctggagaaacggcctttctagcttctgggcctgaa
tttctgaaaacgatcgccaccaacgccccaaaaattgctcaagcttcggcgatcgctccc
caactcactggcgatacaggtaagaaaaatgtagctgtgatgaatatcgtcgttccccgc
gatacaaaacaaccagatgcggcggtgaaatttgctttatttgtcaccaatgacgaaaat
caattagcttttgctaaagctgcaaatgttttaccatccacaactaaagcactagctgat
agttattttaaagatattccggctgatgcttccacagtagaaaaagcgcgagttgtcagc
gcgcagcaattacaacaagcagaaattctcaccccggctttaaaggatattaagaagcta
caaaaggcgatttatgacaacttacaagctgcaatgttaggggaaaaaacggtagataaa
gctgtagaggatgcgtcgcaggagtggaataatcgttag
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