Trichormus variabilis: Ava_3686
Help
Entry
Ava_3686 CDS
T00277
Name
(GenBank) Type IV pilus assembly protein PilM
KO
K02662
type IV pilus assembly protein PilM
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ava02044
]
Ava_3686
02035 Bacterial motility proteins [BR:
ava02035
]
Ava_3686
Secretion system [BR:
ava02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Ava_3686
Bacterial motility proteins [BR:
ava02035
]
Pilus system
Pilus assembly proteins
Ava_3686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PilM_2
Motif
Other DBs
NCBI-ProteinID:
ABA23292
UniProt:
Q3M6U4
LinkDB
All DBs
Position
4594048..4595157
Genome browser
AA seq
369 aa
AA seq
DB search
MVKSFSSLFGKSHRGVGVEIAPERVNVVQIRKQRQGLKLESLTSVPVPEGIVTDGQITDP
PAMAQLIQQALAESKIKKVSRVATGVPGRDSIVRIIPVPSELDDKELRDMVLNHEAGLYL
PYPREEADVDYQKLGYFVDEDGIEKVRVLLVATRKEVTDTYISTFEQAGLQIGVLEINSF
ALIRTIRDQLRQFGPEEATVLVDIEFDSTEIAIIINGVPQFSRTVPIGTYQMQMAFARAM
SLPTSRDMEMLQGLVIPVNSVESDKTGMTETDPGIAGVLRILGELTDELRRSIDFYLNQS
ENVEIAQILLGGPGGGLEQLHEFFTQRLSIPTSQIDPIGSLSLQVDEEKYPSTQRSGLGI
VLGLGMREV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
gtggtgaaaagtttcagtagtctgtttggcaaatctcatagaggggtgggtgtagaaatt
gcaccagaacgggtgaatgtagttcaaatacgcaagcagcgccaaggcttgaaacttgaa
tctttaacatcagttccagttccggaggggattgtcactgatggtcaaatcaccgatcct
ccagcgatggcgcaattaattcagcaggcgctggctgaaagcaaaatcaaaaaagtatct
cgtgtggctactggtgtacccggacgagattccattgtccgcatcatacccgtaccatca
gagttggatgacaaagaattacgggatatggtgttaaatcacgaagccgggttgtattta
ccctatcctcgtgaagaagctgatgtagattatcagaaacttgggtactttgtggatgag
gatggcattgaaaaagtacgggtgctgttagttgctacccgcaaggaggtgacagataca
tatattagtacttttgagcaggcaggcttacaaattggtgttttagaaattaacagtttt
gcactaattcggacaattcgtgatcaactgcggcaatttgggccagaagaagcaacggta
ctagttgatatagagttcgacagtacagaaattgcgatcatcattaatggcgtaccacaa
ttttcccgtactgtccccattggcacttatcaaatgcaaatggcatttgctagagctatg
agtttgcccacttccagagatatggaaatgttacagggattggtgattcctgtaaattcc
gtagagagcgataaaacgggaatgacggaaaccgaccccggtattgctggcgtattgcga
atcctgggagaactaacagatgagctacgccgttctattgatttttacttaaatcagagt
gaaaacgtagaaatagcccagattttattgggtgggcctggtggcggactagaacaactt
catgagttttttactcagcgtttaagtattcctaccagtcaaatcgatcctatagggtct
ttgtccttgcaagttgatgaagaaaaatatccctctacacaacgttctggcttaggaata
gtccttggtttaggaatgagggaggtatga
DBGET
integrated database retrieval system
