Trichormus variabilis: Ava_3689
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Entry
Ava_3689 CDS
T00277
Name
(GenBank) type II and III secretion system protein
KO
K02666
type IV pilus assembly protein PilQ
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ava02044
]
Ava_3689
02035 Bacterial motility proteins [BR:
ava02035
]
Ava_3689
Secretion system [BR:
ava02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Ava_3689
Bacterial motility proteins [BR:
ava02035
]
Pilus system
Pilus assembly proteins
Ava_3689
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
AMIN
STN
Secretin_N
DUF167
Motif
Other DBs
NCBI-ProteinID:
ABA23295
UniProt:
Q3M6U1
LinkDB
All DBs
Position
4596903..4599338
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AA seq
811 aa
AA seq
DB search
MKHVHGNGLVLGAAAFVFLAAQPVWAQTTQITEVKLNPGNGGLSVVLKTSAGSRPQVFTT
KRGKALVADVINTQLRLPQGNNFRQDKPAAGIASVEVVQLDANSIRVIVTGDTDAPVSQP
VTRQQDGITLSLTPSSGTTASAPVTPRPPVSTTPPAATPAQTGAVPNVLVPNPVVTIDGK
PAQPAGPGQPLSQAPPFLPRAVAPPVGDIAISATDASPSTIDLGTQERVPRLVLRDAPVR
EVLSLLARAANLNLAYISDGAGGTPGAGGQAISQTISLDIENEPVQDVFNYVLRLSGLEA
NRSNRTIFVGPKLPNSTRDVVMRNLRLNQVTVGVALNFLVGLGAESAISRERLVTSVNAV
PVGGAANAAVTQTQTTTESRIETQRVDFQDSKPLLRGLQALGDERTNSVTLIGPPKQIEM
AIAQLTQLDIRRRQVVVNVKIVDVNLLNLQDTNASFSFGLGNNYFTSDGGAATLNFGGSR
PATSSEVANSLTGTPTIENPITGTPFLNPNSSVSIPGTTPGTVVVDANGNITRVANPGSG
SFYQPIAPSNTNPLQPGFSDITPATDNIITRNADGTTTITQGTLGTATTSLPTIYQFPKR
LLASLQAQVQNGNAKVLTDPTLIVQEGQQAVVKLTTEVFGGFEESGQSSSTGSNTQSSST
KKPIIKEAGLSLNVKVERIDDNGFVSLSVAPTVSAPGGSTQTSDGQITLLSARSLQSGLI
RLRDGQTLILSGIIQESDRSTVSKLPILGDLPLIGSLFRKTNRTNERREVIVLLTPQVMD
DSQNSSYGYNYSPSPEVRQLLERRGLNTPRR
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacacgttcatggtaatggattagttttaggtgctgctgcttttgtatttttggca
gcacagcctgtgtgggcgcaaaccacacaaattacagaagtcaagctaaatccaggcaat
ggtggacttagcgttgttttaaaaacttctgccggttctcgtccacaagtttttacaaca
aaaagaggtaaagctttagttgcagatgttattaatacgcaactacggcttccacaaggt
aataactttcgccaagataaacctgcggcgggaattgcctccgttgaggtggtgcaacta
gatgctaatagtatccgcgtcatcgtgactggtgatactgatgcaccagttagccaacct
gtcacccgtcaacaagatggcatcaccctcagcttaacgccatcatcaggcaccacagca
tcagcgccagtcacccccagaccacctgtatctacaacaccgccagctgctaccccagca
caaacaggagccgtccccaatgtgcttgtacctaatccagtagtaacaattgatggcaaa
ccagcccagcctgctggccctggtcaaccactaagccaagcgccgccgttcttacctaga
gccgttgcccctcctgttggggatattgccatttctgcgactgatgcttcgcccagtacg
atagatttaggtactcaggaacgtgtgcctcgtctggtgttgcgggatgcaccagttagg
gaagttttatcattactggctcgtgctgccaatctaaacttagcttatataagtgatgga
gctggtgggacacctggggctggaggtcaagccatttctcaaacaatttcactagatata
gaaaatgagccagtgcaagatgtgtttaactatgtcttgcgtctgagtggtttagaagct
aaccggagcaatagaacgatttttgttgggccgaaattacctaactctactcgtgatgtg
gtgatgcgtaacctgcggcttaatcaggtaactgtaggggttgctttaaatttcttggtt
ggcttgggggctgaaagtgccattagccgtgaacgactggttactagtgttaatgctgta
cctgtaggcggtgcagctaatgccgcagtcacacaaactcaaactactacagaaagcaga
atagagactcaaagagttgattttcaagattccaagcctttattaagaggtttacaagca
ttaggggatgagcgtactaattctgtgactttgattggaccacccaagcaaatagagatg
gcaatagctcaactaactcaactggatatccgtcgtcgtcaagtggtagtaaacgtcaaa
attgttgatgtcaaccttttaaatcttcaagacacaaacgcgagtttttcttttggactt
ggtaacaactacttcacaagtgatggcggtgcagcaactctaaattttggtggttctaga
ccagcgactagttccgaagttgcaaacagtttgactggtacaccgactattgaaaatcct
attacaggaacgccttttcttaaccccaacagtagcgtttctattccaggaactactcca
ggtacagtagtagtagacgcaaacggcaacattactagagttgcaaatcctggaagtggc
tctttttatcaaccgattgctcctagtaatacaaaccccctacaaccaggtttctctgat
attactccggcaactgataacatcattacaaggaatgcggatggtacaacaaccatcaca
caaggtacccttggtacagccactacatctttaccaactatataccaattccctaaacgt
cttctcgctagtttgcaggctcaggtacaaaatggcaacgccaaagttttgactgatccg
actttgattgtacaggaaggtcaacaggctgtagtaaaactaactacagaagtgtttgga
gggtttgaagagtcagggcaaagttcatccacaggatcaaatactcaatcttcctctacc
aaaaaacctattatcaaagaagctggtctaagccttaatgtgaaagttgagcgtattgat
gataatggttttgtttctctgtccgttgcaccaaccgtctctgcgcctggtggttcaaca
caaactagtgatggtcagattaccttgttatcagctagaagtcttcaatctggtttaatc
cgtctgcgagatggtcaaacattaattctcagtggcattattcaagaatcagatagatca
actgtatccaagcttcctatcttaggtgatcttccgttgattggttcactatttagaaaa
accaacagaaccaatgagcgtagagaggtaattgtacttctgacacctcaggttatggat
gactctcaaaactcttcttacggctacaactacagtcctagcccagaagtacgtcaattg
cttgagcgtcgtggtttaaatactcccaggcggtaa
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