Trichormus variabilis: Ava_3732
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Entry
Ava_3732 CDS
T00277
Name
(GenBank) SSU ribosomal protein S1P
KO
K02945
small subunit ribosomal protein S1
Organism
ava
Trichormus variabilis
Pathway
ava03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Ava_3732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ava03011
]
Ava_3732
Ribosome [BR:
ava03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Ava_3732
Bacteria
Ava_3732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_2
Spt6_S1
DUF2110
DDT
Motif
Other DBs
NCBI-ProteinID:
ABA23337
CyanoBase:
Ava_3732
UniProt:
Q3M6P9
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All DBs
Position
complement(4643496..4644404)
Genome browser
AA seq
302 aa
AA seq
DB search
MNSESKLSQKANSSFTMDDFAKALENHDYQFQKGQVVYGKVFQLDPDGAYVDIGGKSSAY
IPRDEASLRAVNDLAAVLPLHEELEFIIIREQDAEGQVTLSRRQLEINHIWEKLAQMKEN
SQPVDVKVTGVNKGGVTVDVQSLRGFIPRSHLTERDNLEALKGHTLTAGFLEVDRNNKKL
VLSQRLVTRSSNFNQLEIGQLVEGKITGIKPFGVFVDLNGLSALLHIKQVSQKFIESLEK
VFQPGQTIKAIVIDLDQGKGRVAISTRALENFPGEVLENFEEVMASAEARAHRAANKMSE
GV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgaatcgaaactatctcaaaaagccaactcgtctttcacaatggacgacttt
gccaaagcactagaaaatcacgactaccagttccaaaaggggcaagttgtttacggcaag
gttttccaacttgatcctgatggcgcttatgttgatattggtggcaagtcgtcagcttat
attccccgcgatgaggcttctttgagggcagttaacgatttagcggcagtattgccgttg
catgaggagcttgagtttattatcatccgtgaacaggatgcagaaggtcaagtaactctt
tctcgacggcagttagaaattaatcatatctgggaaaaactggcgcaaatgaaggaaaat
tcccagcctgtggatgtgaaggtgacaggggtgaataaaggtggtgtcactgttgatgtt
caaagcttgcggggatttattccgcgatcgcacctcacagagcgtgataatttagaagcc
cttaaaggtcatactctcacggctggctttttagaagtagaccgcaataacaaaaaactc
gtcctttcccagcgtttggtaactcgttctagtaacttcaatcagttagaaattggtcag
ttagtagaaggtaaaataactggaattaaaccttttggcgtgtttgttgatttaaatggt
ctcagcgccttgctacatatcaaacaagttagccaaaaattcatcgaatccctagaaaaa
gtctttcaacctggtcaaacaattaaagccatagttatcgacttagatcaaggtaaaggt
cgagtggctatctctaccagagctttagaaaacttccctggtgaagtgttagaaaatttc
gaggaagtcatggcttcagccgaagcacgcgctcaccgagctgctaataaaatgagtgaa
ggggtttag
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