Trichormus variabilis: Ava_3734
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Entry
Ava_3734 CDS
T00277
Name
(GenBank) transcriptional regulator, GntR family
KO
K07978
GntR family transcriptional regulator
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ava03000
]
Ava_3734
Transcription factors [BR:
ava03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Ava_3734
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
HTH_36
HTH_Crp_2
MarR
Rrf2
TrmB
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ABA23339
UniProt:
Q3M6P7
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Position
4645494..4646477
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AA seq
327 aa
AA seq
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MIQFRIQPDSEIPASTQLFNQLRFAIASRQYPPAYKLPSTRALAMQTGLHRNTISKVYRQ
LEEDGFVESLAGSGIYVRAQGHEGGSRLQSPILTQHPEASKVLQQALDELLGQGYSLSQA
REIFLAEIDWRLRCSARVLVASPTQDMGVGELMAYELEEELEIPVQIVAIDELAAVLDKT
TSATVVTSRYFINDVEAIAAPKAIRVIPLDIYDYNKEINLLKNLPKDNCVGIVSLSSGIG
RQAEVILHGLRGDELLVMTTQPKDNYKMQAIVKRAEVIICDQACYATVQAAVQAASEDII
RPPKLIKVDNYIGANSINLLKRELGLG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgattcaattccgtattcagccagatagtgagattcccgcatcaacccaactatttaac
caactcaggtttgcgatcgcttctcggcaatatccacccgcatacaaattgcccagcacc
agggctttggcaatgcaaacggggttacaccgcaatactattagtaaagtttatcgtcag
ttagaggaagacggttttgttgaaagtttagcaggctcagggatttatgtccgcgctcaa
ggtcatgagggtggtagcaggctacaatcgcccatcctcacacaacatcctgaagcatca
aaagttttacaacaagcactggatgaattactgggacaaggctattcactcagccaagca
agagaaatatttttggcagaaattgactggcgcttgcgttgtagtgcgcgggtactggta
gcatctccgactcaagatatgggtgtgggggagttaatggcttatgagttagaagaagaa
ctagaaattcccgtgcagatagtggcgatagatgagttagcagccgtactagataaaacc
acttccgctacagttgtcaccagtcgctattttatcaacgatgtggaagcgatcgccgcc
cctaaagctatccgtgtcatccctctagatatctacgactacaacaaagaaatcaacctg
ctgaaaaacctgcccaaagataactgtgtaggaatagtcagcctcagttcgggaattggt
cgccaagcagaagtcatcctccacggcttgcggggtgacgagttattagtcatgaccacc
caaccaaaagataattacaaaatgcaggcgatcgtcaagcgcgccgaagtgattatctgt
gaccaagcctgttatgcaaccgtacaagccgccgtccaagccgcctccgaagacatcatc
cgtccaccaaaattaatcaaggtagataattacatcggcgcaaactcaattaacttactc
aaacgagaactaggcttaggttga
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