Trichormus variabilis: Ava_3852
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Entry
Ava_3852 CDS
T00277
Name
(GenBank) multi-sensor signal transduction histidine kinase
KO
K11354
two-component system, chemotaxis family, sensor kinase Cph1 [EC:
2.7.13.3
]
Organism
ava
Trichormus variabilis
Pathway
ava02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ava_3852
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ava01001
]
Ava_3852
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ava02022
]
Ava_3852
Enzymes [BR:
ava01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Ava_3852
Protein kinases [BR:
ava01001
]
Histidine kinases
CheA family [OT]
Ava_3852
Two-component system [BR:
ava02022
]
CheA family
Cph1-Rcp1 (light response)
Ava_3852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHY
PAS_2
HATPase_c
GAF
HisKA
PAS_9
FAZ1_C
DUF885
Motif
Other DBs
NCBI-ProteinID:
ABA23457
UniProt:
Q3M6C9
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All DBs
Position
4794640..4796937
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AA seq
765 aa
AA seq
DB search
MRIDLESPNINVTSLKEAPIHLSGQIQPHGVLLVLEEPDLKILQVSNNTWSILGIKTEDI
LQKKLEDLLDSFQIERIQAGLSSGNLEFINPTKIWIRKKGDDYAVFDAVFHRNTEGFLIL
ELEPAITQENIPFLSFYHLAKASINQLQKTANLRDFCQIIVQEVRKVTDFDRVMLYKFDD
DGHGSVIAEEKLDSLEPYLGLHYPESDIPKPARKLFISNSIRVIPNAQAQAIQMIPSVNP
VSDRPVDLTNSILRSAANCHLEYLHNMGVGASLTISLIKDNKLWGLIACHHLSAKYVSYE
LRKACEFLGRVIFAEISAREETEDYDYRMNLTHIQSLLVEYMSQEDNFVDGLVKHQPNLL
DLTSAQGAAVCFGDHCTLIGETPKAEDLVFLVQWLKNNVEEEVFYTDSLPQVYPDAERYK
NVASGLLAIPISQRNYVLWFRPEVIQTVNWGGDPNQPFEVNKLDGNVRLCPRKSFELWKE
TVRLTSLPWRYVEIKAALELRKAIVNIVLRQADELAQLAQDLERSNAELKKFAYVASHDL
QEPLNQVANYVQLLEMRYQDELDADANEFITFAVEGVSLMQTLIDDVLAYSKVDTQAIAF
QLTEVEKALDKALGNLRQRIAETGATITHDPLPTVMAGSTQLMQLFQNLIANAIKFHSQE
APQIHIGAERLEDEWLFSVRDNGIGIDPQFSDRIFVIFQRLHTRDEYHGTGMGLAICKKI
IECHRGRIWVESQLGEGATFYFTIPVGGRERERRNGRKTQNNLFS
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgagaatagacttagaatcacccaatattaatgttactagtttaaaagaagcgccaatt
catctttccggacagattcaaccacatggtgtgcttttggttttagaagaacctgatctg
aaaatattacaagtgagcaacaatacttggagtattttgggtatcaagactgaagatata
ttacagaaaaaattagaagacttactcgattcattccaaatagaacgaattcaagcaggc
ttatcttctgggaatctggaatttattaaccctacgaaaatttggattagaaaaaagggg
gatgattacgcagtatttgatgccgtttttcatcgcaatacggaaggctttttgattctg
gagttagaaccggcaattactcaagaaaatatcccgtttttaagcttctatcatctggct
aaagcttcaattaatcagttgcagaaaacagctaatctgcgggatttttgtcagataatt
gtccaagaagtccgcaaagtcaccgattttgatcgggtaatgttatataagttcgatgat
gatggacatggttcagtcatcgcggaagaaaaactagacagcctagaaccatacttagga
ctgcactatccagaatctgatatacctaaaccagccagaaaattatttatttctaattct
attcgggtgattcccaatgctcaggctcaagctatacagatgataccatctgtaaatcca
gtgagcgatcgcccggttgatttaactaactcaattctcagaagtgcggcgaactgtcac
ctggaatatttacacaatatgggtgtcggtgcttccttaactatttccttaattaaagac
aataagctttggggattaattgcttgtcaccatctgtcagccaagtatgtttcctatgaa
ttgcggaaagcctgcgaatttttgggacgggtgatatttgcggaaatttccgccagggaa
gaaacagaagattacgattatcggatgaatctgacccatattcaatctctgttggttgaa
tatatgtcccaagaagataactttgttgatggtttagttaaacatcagccgaatctttta
gatttaaccagcgcccaaggtgcggcggtatgttttggcgaccattgtacattaatcggt
gagactcccaaagcagaagatttagttttcttagtccagtggttgaagaataacgttgag
gaagaagttttctacactgattctctaccgcaagtttatccagatgcggaaagatataaa
aacgtcgccagtggtttgttagcgattcctatttcccaacgtaattacgttttgtggttt
cgaccggaagtaattcaaactgtaaactggggtggtgaccctaatcagccttttgaagtg
aataagttagatgggaatgtgcgtctgtgtccgcgcaaatcctttgagttgtggaaagaa
acagtccgcctcacttctttaccttggcgatatgtggaaattaaagcggctttagaattg
cggaaagcgattgtgaacatcgttctgcgccaagccgatgaactggcgcagttagcacaa
gatttagaacgttccaacgccgaactgaaaaagtttgcttatgttgcatcccatgactta
caagaaccactcaatcaagtagcgaattatgtacagttgttggagatgcgctatcaagat
gaactagatgccgatgccaatgagtttatcacctttgcagttgaaggggtgagcttgatg
caaaccttaattgatgacgttttggcgtattctaaagtagatacacaagcgatcgctttt
caactaacagaagtagaaaaagccttagataaggctttgggtaatttgcgccaacgcatc
gccgaaacaggcgcaaccattactcacgaccccttaccaacggtaatggctggtagtacc
caacttatgcagctattccagaatttgatagccaacgccattaaattccacagtcaggaa
gcgccgcaaattcatataggtgcagaaaggctagaagacgaatggctattctccgtcaga
gataatgggattggtattgacccccaatttagcgatcggattttcgtaattttccaacgc
ttacacacgcgagacgagtatcatggtacaggtatgggcctagcaatctgtaagaaaatt
atcgaatgtcaccggggacgaatctgggtagagtcacaacttggtgaaggtgctaccttc
tactttacgataccagttggaggtcgagagcgtgagcgtagaaacggaagaaaaacacaa
aacaatctttttagttga
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