Trichormus variabilis: Ava_3869
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Entry
Ava_3869 CDS
T00277
Name
(GenBank) transcriptional regulator, AraC family
KO
K07506
AraC family transcriptional regulator
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ava03000
]
Ava_3869
Transcription factors [BR:
ava03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Ava_3869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_AraC
HTH_18
CTP-dep_RFKase
Motif
Other DBs
NCBI-ProteinID:
ABA23474
UniProt:
Q3M6B2
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Position
complement(4823842..4824756)
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AA seq
304 aa
AA seq
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MMSEEKILSVDFTQEDAYTEILPRSPLVSSYHAQWQGLRLDVHQQPGHETPEHSPQQHVL
TVSLEQQIVRSERILDGRLQYENIAKGDVAIIPAQTRHISRWQSEAKFLVLSMEPAFFTR
MVIEAGDLQKIEIKPRFAAPDPLIQQIGLALQTELESEHKGSSIYIESLTTTLCIHLLKH
YCVTGGTILDDHHHKGLSHWKLRQAISYIHENLDQDLTLVDISTAVGMSMYYFSRQFKQS
TGFAPHQYVMNCRIERAKKLLGSTNKTIEQICTQVGFQSQSHFTNVFRKLMGITPRVYRE
QVKT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggaagagaaaatcttaagtgttgattttactcaagaagatgcctatacagaa
attctaccgcgatcgcccctggtttctagttatcatgcccaatggcaaggtctacggtta
gatgttcaccaacagcccggtcatgaaactccagaacacagcccacagcaacacgttctc
actgttagtttagagcagcaaatagtccgttcagagcgcatacttgatgggcgtttgcag
tacgagaatatagctaagggcgatgtggcaatcattcctgcccaaactcgtcacatatca
cgctggcaatcagaagcaaaatttctcgtcctcagcatggaaccagctttttttacacgt
atggtaatagaagctggagatttacagaaaattgaaataaaacctcgttttgctgcacca
gatcctttaattcaacaaattgggctagcactccaaacagaactagaatctgagcataaa
ggaagtagcatttacattgaatctctgacgaccacgctttgtattcacctactcaaacac
tattgtgtaacaggtggaaccatccttgacgaccatcatcataaaggactttcacattgg
aaactcagacaagcaatttcctacattcatgaaaatcttgatcaagatttgactttggtt
gatatttccacagcagtaggaatgagtatgtattatttttcgcgccaatttaagcaatca
actggttttgcaccacatcaatatgtcatgaattgccgaattgaacgcgcaaaaaagtta
ctgggtagcactaacaaaaccatagagcaaatatgtacccaagtcggctttcaaagccaa
agccacttcacaaatgtatttcgtaaactcatgggtattacacccagggtatacagggaa
caagtcaagacttaa
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