Trichormus variabilis: Ava_3876
Help
Entry
Ava_3876 CDS
T00277
Name
(GenBank) transferase hexapeptide repeat protein
KO
K03818
putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
Organism
ava
Trichormus variabilis
Pathway
ava00543
Exopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00543 Exopolysaccharide biosynthesis
Ava_3876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hexapep
LbH_EIF2B
DCTN5
Hexapep_2
Albumin_I
Motif
Other DBs
NCBI-ProteinID:
ABA23481
UniProt:
Q3M6A5
LinkDB
All DBs
Position
4829695..4830258
Genome browser
AA seq
187 aa
AA seq
DB search
MTNDKPFVDLRLYDQSWFDRGRSAWYILLWWLVQAIAFPLTPHPSSNIRCWLLRLFGARI
GRGVVVRPTARFTFPWKVTIGDYSWVGDDVVLYSLDEIHIGQHCVISQKSYLCTGSHDIQ
DPTFRLKVAGITIGNGAWVATDCFIAPGVEIGANAVIGARSSVFTNMPAGQVCWGSPCRP
QHPRLKE
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgacaaaccctttgtagatttacgcctgtacgaccaatcttggtttgatcgg
gggcgttcagcttggtatattttgttatggtggttggtgcaggcgatcgcctttcctctg
actccccatccttctagtaacatccgttgttggctattacgtctgtttggtgcgcggatt
ggtagaggtgtggtagttcgtcccactgcacgttttaccttcccctggaaagttaccatc
ggggattacagttgggttggcgatgatgtagttctctacagtctagatgaaattcacatc
gggcaacactgcgtaatttcacagaaaagttacctatgtacaggtagccatgatatccaa
gaccctacattcagattaaaggtagcagggattaccattggcaacggcgcttgggttgct
acagattgtttcatcgcaccaggggtggaaataggagctaacgccgtgattggcgctcgc
agcagtgtttttactaatatgccggctgggcaagtttgctggggtagcccttgccgtcct
cagcatcccaggttgaaggagtga
DBGET
integrated database retrieval system
