Trichormus variabilis: Ava_4054
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Entry
Ava_4054 CDS
T00277
Name
(GenBank) Mo-nitrogenase iron protein subunit NifH
KO
K02588
nitrogenase iron protein NifH
Organism
ava
Trichormus variabilis
Pathway
ava00625
Chloroalkane and chloroalkene degradation
ava00910
Nitrogen metabolism
ava01100
Metabolic pathways
ava01120
Microbial metabolism in diverse environments
ava01310
Nitrogen cycle
Module
ava_M00175
Nitrogen fixation, nitrogen => ammonia
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
Ava_4054
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
Ava_4054
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_NifH
AAA_31
CbiA
ArsA_ATPase
ParA
CBP_BcsQ
MeaB
MipZ
NB-ARC
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ABA23658
UniProt:
Q3M5S8
LinkDB
All DBs
Position
complement(5039282..5040256)
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AA seq
324 aa
AA seq
DB search
MSDENIRQIAFYGKGGIGKSTTSQNTLAAMAEVGQRILIVGCDPKADSTRLILHTKAQTT
VLHLAAERGAVEDLELDEVVLKGFRDIKCVESGGPEPGVGCAGRGIITAINFLEENGAYQ
DVDFVSYDVLGDVVCGGFAMPIREGKAQEIYIVTSGEMMAMYAANNIARGILKYAHSGGV
RLGGLICNSRKTDREDELITTLANRLSTQMIHFVPRDNIVQHAELRRMTVNEYAPDSNQA
NEYRTLADKIINNQNMAVPTPIEMDELEALLIEFGILESDEDKEKLVGMSKAEEEALKKQ
EELKAQALEAVQKGNVEVVSRNNK
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaaaacattagacagatagctttttacggtaaaggcggtatcggtaaatcc
accacttcccaaaataccctcgcagcaatggcagaagtgggacaacgtattctgattgtc
ggatgtgaccccaaagcagactctacccgcttgattctccacaccaaagcacaaactacc
gtacttcacttagctgctgaacgcggtgcagtggaagacttagaacttgatgaagtagta
ctcaaaggcttccgcgatatcaaatgcgtagaatctggtggtccagaacccggtgtaggt
tgcgctggtcgtggtattatcaccgctattaacttcctcgaagaaaacggtgcatatcaa
gacgtagatttcgtatcttacgacgtattaggtgacgttgtatgcggtggtttcgccatg
ccaattcgggaagggaaagcgcaagaaatctacatcgttacttccggtgaaatgatggcg
atgtacgctgcaaacaacatcgctcgcggtattttgaaatatgctcactccggcggtgta
cgcctgggtggtctaatttgtaacagccgtaaaactgaccgggaagacgaactgattacc
acactcgcaaaccgattaagtacccagatgattcacttcgttccccgcgacaacatcgtg
cagcacgcagagttacgccggatgactgtgaacgaatacgcacctgatagcaatcaagct
aatgaataccgcacattagccgacaagattatcaacaatcaaaatatggctgttcctaca
cccatcgaaatggatgagttagaagcattgttgattgagttcggtatccttgaaagcgac
gaagacaaggaaaaattggtcggtatgagcaaagctgaagaagaagctctcaagaagcaa
gaagaactcaaagctcaagcactggaagctgtgcagaaaggcaacgttgaagttgtttcc
cgtaacaataaatag
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