Trichormus variabilis: Ava_4065
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Entry
Ava_4065 CDS
T00277
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
ava
Trichormus variabilis
Pathway
ava04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Ava_4065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ava03016
]
Ava_4065
Enzymes [BR:
ava01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
Ava_4065
Transfer RNA biogenesis [BR:
ava03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Ava_4065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
QueC
NAD_synthase
Arginosuc_synth
DUF7411
Asn_synthase
ThiI
Motif
Other DBs
NCBI-ProteinID:
ABA23669
UniProt:
Q3M5R7
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All DBs
Position
5054098..5055156
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AA seq
352 aa
AA seq
DB search
MKKVVVGLSGGVDSSTAAAILHNQGYEVIGLTLWLMKGKGQCCSEGMIDAAYICEQLGIP
HEVVDMRDVFQTHIVDYLVTGYGAGITPLPCSQCNKTVKFGPMVQYAREQLGCDRIATGH
YARISYDEASGRYQLLRAVDRNKDQSYFLYDLSQDLLAASLFPLGEMEKADTRRIATEHG
LKTADKPESQDLCLVESNGSMRAFLDKYIAPKKGDIVDTAGKILGQHDGVHHYTIGQRKG
LGIAAPEPLYVVELDAVNNKVVVGDRTKATQEECTVSRVNWVSIPEPSTPIRAAVQIRYR
SAPEPVTVIPLENSRVRLVFDEPQFSITPGQAAVWYDGDKVLGGGIIEQFSN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagttgtcgtcggtctttctggtggcgttgacagttccacagccgccgctatc
ctccataatcagggctatgaagtaattggtttaaccctttggctaatgaaaggcaaaggt
cagtgttgctctgaagggatgatcgacgcggcttatatttgtgaacagttaggcattccc
catgaagtggtggatatgcgggatgtgtttcaaactcatattgtcgattatctagtaact
ggttatggtgctgggattacgccattgccttgctctcagtgcaacaaaacggtaaagttc
ggcccaatggtacagtatgccagggaacaattgggatgcgatcgcatcgctacaggtcat
tatgcccgtattagttacgacgaagcaagtggacgttaccaactattaagggctgttgac
cgcaacaaagaccaatcttattttctgtatgatttgtctcaagatttactggcagcctcg
ctatttcctctaggggaaatggaaaaagctgatacccgtcgcattgccacggaacatgga
ctaaaaactgccgataagccagaaagccaagacctgtgcctagttgaaagtaacggttcc
atgcgagcttttctggataagtatatcgcacccaaaaaaggcgatattgtggataccgca
ggcaaaattttagggcaacatgatggtgtccatcattacacgattgggcaacgtaagggc
ttagggattgcagcacctgaaccactgtatgtggtggaattggatgcagtcaataataaa
gtagtagtaggcgatcgcactaaagctactcaagaagaatgtactgtcagccgagtcaat
tgggtttccatccctgaaccatccacaccaattcgtgcagccgtacaaatccgctatcgt
tctgcacctgaaccagtgacagtcattcctctggaaaactcccgcgtccgcttggtattt
gatgaaccccaattcagcatcacccccggacaagcagcagtgtggtatgacggcgataaa
gttttgggtggtgggattattgaacaatttagtaattaa
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