KEGG   Trichormus variabilis: Ava_4174
Entry
Ava_4174          CDS       T00277                                 
Name
(GenBank) CRISPR-associated protein, Cas6 family
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
ava  Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:ava00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ava02048]
    Ava_4174
Prokaryotic defense system [BR:ava02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    Ava_4174
   Subtype I-D factors
    Ava_4174
SSDB
Motif
Pfam: CRISPR_Cas6_N CRISPR_Cas6 Cas_Cas6_C Cas6_I-A
Other DBs
NCBI-ProteinID: ABA23773
UniProt: Q3M5G3
LinkDB
Position
5223900..5224772
AA seq 290 aa
MPHSLVLNLLPQSPIPPQYITGRHLHALFLTLVSSVDSTLGDRLHDSTADKAFTLSPLQI
KGEERGRYKSKIPHGQSLQYFHQQAIPAGTPCWWRISLLDDTLFSQLTQLWLNLNPSHPW
HLGPANLYITSIQGTPQSTQPWANATTYAQLYEQAGESNDVRSLVNNRTLNFTFTTPTAF
RQGKFDTTLPTRECVFNSLLSRWNKYSGIEFSEIAIESIFPSFLNIHTEILADSRSKFIG
ILGEINYRILGDIEPIQIKQINALADFAMYAGIGRKTTMGMGMIRRLYSA
NT seq 873 nt   +upstreamnt  +downstreamnt
atgcctcatagcttagttttaaacctgcttccccaatctcccattcccccgcaatatatc
accggtagacatttacacgccttatttctcacccttgttagttctgttgatagcacatta
ggcgatcgcttgcacgactctaccgccgataaagccttcaccctttctcccttgcaaatt
aagggagaggaacggggtagatataaatcgaaaatccctcatggccaatcattgcaatac
ttccatcagcaagccatccccgccggaacgccttgttggtggcgcatctccttacttgat
gacaccttatttagccaactaacgcaactatggcttaatcttaaccctagccatccttgg
catctcggcccggctaacttgtatattaccagcattcaaggcacaccccaatccacccaa
ccttgggcaaatgctactacctatgctcaattgtatgagcaagctggtgagagcaatgat
gtgcgatcgctcgtaaataatcgtacactaaactttaccttcaccacacccacagccttc
cgccagggaaaatttgacaccacccttcccaccagagaatgtgtatttaactctctcctt
tcccgatggaataaatacagtggtatagaattttctgaaattgccattgaatcaattttt
ccctcgtttctcaatattcacacagaaatattagccgattctcgtagtaaatttattggt
attcttggagaaatcaactatcgaattttaggtgatatagagccaattcaaattaagcaa
atcaatgccttagcagactttgctatgtatgcaggaatagggcgtaaaactacaatggga
atgggtatgattcggcggttgtattctgcataa

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