Trichormus variabilis: Ava_4231
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Entry
Ava_4231 CDS
T00277
Name
(GenBank) putative ABC-2 type transport system permease protein
KO
K25151
gliding motility-associated transport system permease protein
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_4231
Transporters [BR:
ava02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Gliding motility-associated transporter
Ava_4231
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_2
ABC2_membrane_3
ABC2_membrane
ABC2_membrane_4
Na_H_antiport_2
GPR_Gpa2_C
Motif
Other DBs
NCBI-ProteinID:
ABA23830
UniProt:
Q3M5A6
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Position
5308096..5308908
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AA seq
270 aa
AA seq
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MGIVLSNIIAIYRRELQSYFVSPLAYAIASVFWFIAGLFLVMILLGPNGILVYVASLDVQ
GQQLGVPVPPIDVPAEFIQAFLDRLGWLLLFILPVLSMGLYAEERKRGTLELLATSPVTN
WAVAVGKLLGVLTFFITLVVPLLLFEAIALSSSNPPMPATIPLLAHLGLILLAAAILSLG
MFISSLTDSTILSAVFTFALVLLLLFVDVIAKGIGGPVGEIIGHLSLLKHYNTFIQGIFD
TSALILFASYIFLGIFLTAQSIDALRFQRN
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgggtatagtcttgagtaatattattgccatttatcgccgagagttacagagttatttt
gtctcacctttagcttatgcgatcgcctctgtattttggttcatcgctgggttattttta
gtgatgattttactggggccgaatggtattttagtatacgtcgcttctttggatgtacaa
ggacaacaactaggagtaccagtccccccaattgatgtaccggcggaatttatccaggca
tttttagatcggttgggttggctattattatttatcttgccagtgttgtcgatgggattg
tacgccgaagaacgcaaacgcggtacattggaacttttagccacctcaccagtcactaat
tgggcagtagcggttggtaaattattaggtgtgctgacattttttattactctagttgta
ccattactactattcgaggcgatcgcccttagtagttctaatccaccaatgccagcgaca
atacccctactcgctcatttggggttaatcttactagcagcagccattttatccttagga
atgtttatttcttccctaacagacagcactatcttatctgcggttttcacctttgcccta
gttttattactgttatttgtggatgtaattgctaaaggtatcggtggccctgtaggagaa
ataattgggcatttatctctactaaaacattacaacacattcattcaaggcattttcgac
accagcgccttaatattatttgccagttacatctttttgggaatcttccttacagcccaa
tcaattgatgcactgagatttcagcgtaattag
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