Trichormus variabilis: Ava_4232
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Entry
Ava_4232 CDS
T00277
Name
(GenBank) conserved hypothetical protein
KO
K25153
gliding motility-associatede transport system auxiliary component
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_4232
Transporters [BR:
ava02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Gliding motility-associated transporter
Ava_4232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_transp_aux
DUF7088
IFT52_GIFT
OST48_N
DUF4350
DUF2194
DUF2157
Motif
Other DBs
NCBI-ProteinID:
ABA23831
UniProt:
Q3M5A5
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Position
5309002..5310894
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AA seq
630 aa
AA seq
DB search
MKIIKQKQLWKYLFWLGPFLIMAGLTAGLVSDTWGTITLVLLISGIVIIGLWLAWQSQRS
HWWKRRSTQAGTNAIAATLAILVILGLINFLGSRYQVRADLTEAQLFTLSPQSQQLVQNL
QQPVKVWVFDVIQNPQDQQILENYRRKSTNFDFEYINPQTRPGLAEKFGVKNYGDYGQVF
IESGNRRQLVQTLSVNERLSEIRLTNRLQQIISDRTAKVYFLQGHGEHPITAGEGTISQA
VQALSDKNYNSSPLNLVENAKVPDDADVVVLAGPKRGLFDPEVKALQDYLNRGGNALLMI
DPSTNPNINSLLQEWGVRLDDRLAVDVSGTGAQLGPAAPIVTDYGQHPITKEFGNNISYY
PLARPLEITPVAGVESTPLLKTKAYPDSWAESDLQNENLQFNPEKDLKGPLTLGVALTRK
LPAPSSPTPTISPTTPASPTPSPTASPTNQTQASPIPSASPTTPANPTPTISPTTPASPT
PSPTASPTNQTQASPIPSASPTTPANPTPTISPTNQSQASPIPSPSPTTTPPSEQKPEKS
ATESRLVVIGNSDFITNAIFEQQLNGDVFLNSVTWLSQQDQQLLSIRPKEPRNRRMNLST
SQANVLTLSSLFVLPLLGLVTAAIIWWKRR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcattaaacaaaagcaactttggaaatatctgttttggctggggccgtttttg
ataatggcgggtttaacagccggattagtttctgatacctggggaacaattaccctagta
ttattaatttctggaattgtcatcattgggttgtggttagcgtggcaaagtcagcgtagt
cattggtggaagagacgttctacccaagctggtactaacgctatcgcagcaactctggca
attttggtaattttgggactgataaactttttagggagtcgctatcaagtacgggcagat
ttaacagaagcccagttatttaccctatcaccacagtcacagcaactggtgcaaaatctc
caacaaccagtaaaagtttgggtgtttgatgtcattcaaaatccccaagaccaacaaatt
ttagaaaattatcgccgcaaaagtactaactttgattttgagtatattaatccccaaact
agaccaggactagcggaaaaatttggcgttaaaaattatggtgattatggtcaagttttt
atagaatctggcaatagacggcaattagtgcaaaccctgagtgtgaatgaacgtctgtca
gaaattcgcttaaccaatcgcctacaacaaattattagcgatcgcaccgccaaagtctac
ttcctccaaggtcatggcgaacacccaattactgcgggtgaaggtactatctcacaagca
gtccaagcattaagcgataagaactataattcctcgcctttgaatctagtagaaaatgct
aaagtgcctgatgatgctgacgttgtagtcctagcaggccctaaacgggggttatttgac
ccagaggtcaaagcattacaagattatctcaatcgtggtggtaacgccctactcatgatt
gaccccagcaccaaccccaacatcaacagcttactgcaagaatggggtgtacgcttagat
gatcgtttagcagtcgatgtctctggaactggcgcacaactcggcccggctgcacctata
gttacagattacggacaacacccgattacaaaagagtttggtaacaatatttcctattac
cccctagccagacctctagaaattaccccagtagctggtgtagagtctaccccattgtta
aaaaccaaagcctatcccgacagttgggcagaaagcgacctacaaaacgaaaatttgcaa
tttaaccccgaaaaagacctgaaagggcctttaaccttgggtgtagctttaactagaaaa
ctaccagccccatctagccctactcccaccatatccccaacaacaccagcaagccccact
ccttcacccactgcatccccaacaaatcaaactcaagccagtcccattccttcagcatcc
ccaacaacaccagcaaaccccactcccaccatatccccaacaacaccagcaagccccact
ccttcacccactgcatccccaacaaatcaaactcaagccagtcccattccttcagcatcc
ccaacaacaccagcaaaccccactcccaccatatccccaacaaaccaaagtcaagccagc
cccattccttcaccatccccaacaacaactcccccaagcgaacagaagcctgaaaaatca
gccaccgaatcacggctagtagtgatagggaattcagatttcatcaccaacgccatattt
gaacagcaattaaatggggatgtcttccttaattccgtcacctggctaagtcagcaagac
cagcaactcctttcgattcgtcctaaagaaccaagaaatagacgaatgaacctatccacc
tcacaagccaatgtcttaacactatcgtctttgtttgttttacccttactcggcttagtc
acagccgccattatctggtggaagcgtagatga
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