Trichormus variabilis: Ava_4410
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Entry
Ava_4410 CDS
T00277
Name
(GenBank) carbamoyl-phosphate synthase small subunit
KO
K01956
carbamoyl-phosphate synthase small subunit [EC:
6.3.5.5
]
Organism
ava
Trichormus variabilis
Pathway
ava00220
Arginine biosynthesis
ava00240
Pyrimidine metabolism
ava00250
Alanine, aspartate and glutamate metabolism
ava01100
Metabolic pathways
ava01110
Biosynthesis of secondary metabolites
ava01240
Biosynthesis of cofactors
Module
ava_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Ava_4410
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Ava_4410
00220 Arginine biosynthesis
Ava_4410
Enzymes [BR:
ava01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Ava_4410
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Motif
Pfam:
CPSase_sm_chain
GATase
Peptidase_C26
GATase_3
DJ-1_PfpI
Motif
Other DBs
NCBI-ProteinID:
ABA24008
UniProt:
Q3M4S8
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All DBs
Position
5528955..5530121
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AA seq
388 aa
AA seq
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MPLSDAIPALLVLADGTAYRGWSFGATGTTIGEVVFNTGMTGYQEVLTDPSYCGQIVVFT
YPELGNTGVNPEDEESARPQVRGAIARNICHKPSNWRSAQSLPDYLKQHQIPGIFGIDTR
ALTRKIRMYGAMNGGISTEILDEAELLEQVQAAPNMAGLNLVREVTTSTVYEWSDPTTAV
WEFNPEGTVNNGESLTVVALDFGVKRNILRRLASYGCRVIVVPADTSPEAILKYNPDGIF
LSNGPGDPSAVTEGITTAKVLLESEKPIFGICMGHQILGHALGAETFKLKFGHRGLNQPA
GLQQRVEITSQNHSFAIDPDSLPEAVVEISHLNLNDRTVAGLRHKSLPIFSVQYHPEASP
GPHDADYLFAQFVHQMRTTKQATTAEVS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgtctgacgcaatacctgctctccttgtcttggcagatggaactgcttaccgt
ggttggtctttcggtgcgacgggaaccaccattggcgaagtcgtcttcaacaccggtatg
actggctatcaagaagtattgactgaccctagttactgcggacagattgtcgtgtttacc
tatcccgaattggggaatacaggcgttaatcctgaagacgaagaatcagcacgtccccaa
gtgcggggtgcgatcgcccgaaatatttgtcataaaccgagtaactggcgatcggcacaa
tccttacccgactacctcaaacagcaccaaatccccggtatctttggtatagatacccgc
gccctcactcgcaaaattcggatgtacggagccatgaacggcggcatctccacagaaatt
ttggatgaagcggagttgttagaacaggtacaagcagctcccaacatggcaggcttaaat
ctagtccgggaagttaccacctctacagtttacgaatggtcagatcccacaacagcagtt
tgggaatttaacccagagggtacagtaaataatggggaatccttgacagttgtcgcccta
gattttggtgttaaacgcaatatattacgtcgtttagccagttatggttgccgagtcatt
gttgtacctgccgatacatcaccagaagcaatcctaaaatacaatccagatggtattttc
ctctcgaacggccctggtgacccctcggcagttacagaaggtattaccacagccaaagta
ttgctcgaaagtgaaaaacccattttcggtatttgtatgggacaccaaattttgggtcac
gccttgggagcagaaacctttaagctgaaatttggacatcggggtttaaatcaaccagca
ggtttacaacaacgggtagaaatcaccagccaaaaccacagctttgccattgacccagat
tctttacctgaggcagttgtggaaatcagccacctcaatttaaacgatcgcactgttgcc
ggtctgcgccacaaatctctacctatcttttcagtacagtaccacccagaagccagccct
ggtcctcacgatgctgattacttgtttgcccagtttgttcatcaaatgcggacaacaaaa
caagccactacagcagaagtgagttaa
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