Trichormus variabilis: Ava_4428
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Entry
Ava_4428 CDS
T00277
Name
(GenBank) Fmu, rRNA SAM-dependent methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ava03009
]
Ava_4428
Enzymes [BR:
ava01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
Ava_4428
Ribosome biogenesis [BR:
ava03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Ava_4428
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_31
Methyltr_RsmF_N
FtsJ
Methyltransf_25
Ubie_methyltran
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
ABA24026
CyanoBase:
Ava_4428
UniProt:
Q3M4R0
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All DBs
Position
5546990..5548339
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AA seq
449 aa
AA seq
DB search
MTNSRQIAFIALRDVHKGAYTDVALDRALQKANLSDIDRRLVTELLYGSVRRQRTLDFII
DQLAKKKSHQQPTELRSILHLGLYQLRYQERIPASAAVNTTVELAKDNGFAGLTGFVNGL
LRQYIRLAEASPDFLELPENPVERLGILHSFPDWIIKVWLEQLGLTETEKLCEWMNQTPT
LDLRVNPLRTSVAEVETALKSAGVLARPIPHLPQALRLIGNTGSIQKLPGFSQGWWVVQD
ASAQLVSHLLDPQPGEVIIDACAAPGGKTTHIAELMKDQGKVWAGDRTASRLRKLKENAQ
RLNLHSIEICTGDSRNLPQFYNVADRVLLDAPCSGLGTLHRHADARWRQTPESVQELSTL
QQELLSHTSKFVKVGGVLVYATCTLHPAENEEVITEFMARNSDWQIEPPSPDSPYSDYTT
PQGWLKVWPHNQDMDGFFMVRLRKTNVSE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgactaattcccgtcaaatagcttttatcgccctgagagacgtgcataaaggggcttac
acagatgttgctttagatagggcgttgcaaaaagcaaatttatcagatattgaccgccgt
ctagtgacagaattactgtatggcagtgttagaagacaacggactcttgattttattatt
gaccaactcgccaaaaagaaatcgcaccaacagccaacagaactccgcagtatcttacat
ctaggtttatatcaactgcgttatcaagagcgtatccctgcttctgcggctgtgaatacc
actgtagaattagcgaaagataatggtttcgctggactgacaggttttgttaatggttta
ttacggcaatatatccgtttggctgaagcatcaccagactttctcgaattaccagaaaat
ccggtggaaaggttgggaattttacatagcttccctgactggattatcaaagtatggttg
gaacagttgggtttgacggagacggaaaaactctgtgaatggatgaaccaaacaccaacc
cttgatttgagagtcaaccccttacgtacttccgttgcagaagtggaaacagctttaaaa
tctgcgggggttttggctagacctattccccatttaccccaagctttacgacttattgga
aatactggttccatccaaaaacttccagggtttagtcaaggttggtgggttgtgcaggat
gctagcgctcagttagttagtcatttgcttgatccccagcccggtgaagtgatcattgat
gcttgtgctgcaccgggagggaagacgactcacattgctgagttaatgaaagatcaggga
aaagtttgggcaggcgatcgcactgcttcacgtttgcgtaagctgaaagagaatgcccaa
cgcctgaatttacactcgattgaaatttgcacaggtgacagtcgcaacttaccacaattt
tataatgttgctgaccgtgttttactggatgccccatgttctggcttggggactttgcac
cgccatgctgatgcgcgctggcgacaaacaccagaatctgtccaggaactctcgacgctg
caacaggaattattatcacatacatcaaaatttgtcaaagttgggggtgtgctggtttat
gccacttgcacgttacatccggcagaaaatgaagaagtaattacggaatttatggctaga
aattctgattggcaaattgagccgcctagtcctgattccccttattctgactacactaca
ccacaaggttggctgaaagtttggcctcacaatcaagacatggacggctttttcatggtg
cgcttaagaaaaaccaacgtttccgaatga
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