Trichormus variabilis: Ava_4452
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Entry
Ava_4452 CDS
T00277
Name
(GenBank) Glycoside hydrolase, family 38
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
ava
Trichormus variabilis
Pathway
ava00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Ava_4452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ava04131
]
Ava_4452
Enzymes [BR:
ava01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
Ava_4452
Membrane trafficking [BR:
ava04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
Ava_4452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Glyco_hydro_57
EABR
Motif
Other DBs
NCBI-ProteinID:
ABA24050
UniProt:
Q3M4N6
LinkDB
All DBs
Position
complement(5573021..5576197)
Genome browser
AA seq
1058 aa
AA seq
DB search
MTPTESQYQTDLISDTIEKLRSCCQVNVQSTWLYQDSNTEITGVATSSISNWQPVELDTK
GNIAWTGGQQVLWLEQKFVVPQNLHDYPLAGLSLRLSLLWWADSAKIYVNGQLVLEGDLF
DCSPRVLLSREVSPGQEFVVALRLASPGHCDGALVRSLLVYESTDYNYPDPGFIADELAI
LQLYLEKFAPEKLNILTQAIPEIHPSNPESLVTFRQNLINHLSISDPKFKIYLLGHAHLD
LAWLWSVSETWNAAQNTFTSVLKLQQDFPELIFCHSTPALYAWIEEHRPDLFTAIQQAVA
AKKWEVIGGFWVEPDLNLIAGESIVRQLLYGQRYFQEKFGKLTTVVWVPDTFGFCATLPQ
FLANAGIEYFVTQKLRWNDTTKFDYGAFWWRSPDGSQVLSVMSATIGEGIDPIKMAAYSL
EWQTQTCLTQSLWLPGVGDHGGGPTRDMLETAQRWQTSPFFPDLEFITAEKYLQQIQSTV
NGQQSIVNSQRSTFPIWNDELYLEFHRGCYTTHADQKRWNRHSENLLYEAELFATLATFI
CGVTYPKSDIETAWKQVLFNQFHDILPGSSITQVYTDALPEWQQVEQTGTKILKESLQAI
ASHFTLPEPPKTDSLPIFVFNSLNWQRSEVVSVTLPPPPPNQQWQVYDTTGKQIISQLTE
PSTILFLAEDIPSVGYRLFWLSPTSPTSSTSPTSSTSLDYILENEHLRVIVDPDTGDLSS
IYDKTHQREVLSGAGNQLQAFKDSGQYWDAWNIDPNYSQHPLPATNLKSIQWLEQGTVQN
CLRVVRQLGKSEFCQDYILQVGLPQLKIVSRVNWQEKHVLVKAAFPLNVTADFATYEIPC
GAIRRPTQPQTPQDKAKWEVPALRWADLTAETDEGLYGVSLLNDCKYGYDSQPQLLRLTL
LRSPTWPDPEADTGGIHEFAYTVYPHADSWESAHTVQKGYELNIPLQVILNPTQHFQLNT
SKSTPNTRDKASFLNLPAENLVLMAVKPSEDDQQQLILRFYESHGVTTELSLQSDLKLTL
GIPVDLLERPISQFSSGQQISTIEPWKIATFKVLEVRG
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgacccctaccgaatctcagtatcagacagatttaatctcagacacaattgagaaatta
cgcagttgttgtcaagttaatgttcaatctacttggttataccaggactcgaacacagaa
attactggcgttgctacatctagtatatccaattggcaacctgtagagttagataccaag
ggtaacattgcttggactggtggacagcaagtactttggctagaacagaaattcgtagtt
ccccaaaatttacatgattatcctttggcggggttgtctttgcggctgtctctactttgg
tgggcggactctgccaaaatctacgtgaatgggcaattagtgctagaaggagatttattt
gattgttcccccagagttttactcagtcgggaagtatcaccaggacaagaatttgtagtg
gctttgcggctggcgagtcctggtcattgtgatggtgctttagtgcgatcgctccttgtc
tacgagtctacagattataattatcctgaccccggttttattgccgatgagttagcaata
ttacagctttatttagaaaagttcgccccagaaaagttaaatatcctcacacaagcaatc
ccagaaattcatccctccaacccagaatctctagttaccttccgtcaaaacctgataaat
catctctctatcagcgacccaaaatttaaaatctatttattaggtcacgctcatttagat
ttagcatggctatggtcagtcagtgaaacttggaatgcagcccaaaacacttttacatca
gtcctcaaactacaacaagattttcccgaattaatcttctgtcattccaccccagccctg
tatgcttggattgaagaacatcgtccagatttatttacagcgattcaacaagctgtagct
gccaaaaaatgggaagttatcggcggtttttgggtagaacctgaccttaatttaatcgct
ggggaatccatagtccgtcagttactatacggtcaacgctatttccaagaaaaatttggc
aaactgacgactgtagtttgggttcccgacacctttggtttttgtgcaaccctaccgcaa
tttttggcgaatgcaggtattgagtatttcgtgacgcaaaaattacgatggaacgatact
actaaatttgattatggggctttttggtggcgatcgcctgacggtagtcaagtattaagt
gttatgtctgcaaccataggcgaaggcattgaccccatcaaaatggcagcctattctcta
gaatggcaaacccaaacctgcttaactcaatctttatggcttcctggtgtcggtgaccac
ggcggcggccccacccgtgatatgttagaaaccgcccaacgctggcaaacttcaccattt
ttcccagacctagaatttatcaccgccgaaaagtatctccagcaaattcagtcaacggtc
aatggtcaacagtcaatagtcaatagtcaacggtcaacatttcctatatggaatgatgaa
ctatatctagaatttcatcgtggttgttacactacccacgcagaccaaaaacgttggaat
cggcattctgaaaatttactatacgaagccgaactatttgctaccttggcaacttttatc
tgtggcgtgacatatcccaaatccgacatcgaaacagcttggaagcaagtattatttaac
caattccacgatattttacctggttcttccattacccaagtatatacagatgccttgccc
gaatggcagcaagtcgaacaaacgggaaccaaaatattaaaagaatcattacaggcgatc
gcatctcactttactctaccagagccaccaaaaaccgatagtctacccattttcgttttc
aattctctcaactggcagcgctctgaggtagtatcagtcaccctacccccaccaccacct
aaccaacaatggcaagtctacgatactactggcaaacaaatcatttcccaattaactgaa
ccatcaaccatactattcctcgccgaagatattccctctgtaggctatcgcctcttttgg
ctttcccccacatcgcccacatcttccacatcgcccacatcttccacatccctagactat
attctcgaaaatgaacacctgcgcgttattgtagatcctgatactggagatttatcaagt
atctatgacaaaactcatcaacgagaagtattgtctggtgcgggtaatcaactacaagct
tttaaagacagtggtcaatattgggatgcttggaatatcgaccccaattatagtcagcat
cccctaccagcaactaacctcaaatctatccagtggttagaacaaggaactgtacagaat
tgtctccgcgtagtgcgtcaattgggtaagtcggaattttgccaagactatatcttgcaa
gtcggcttaccccaattgaaaatcgtttctagagtcaattggcaagaaaagcacgtttta
gtcaaagcagcgtttcctctcaacgttacagccgactttgccacctacgaaattccctgc
ggtgcaattcgtcgcccgactcaaccccaaaccccgcaggataaagcaaaatgggaagtc
ccagctttacgttgggctgatttaacagcagagacagatgagggtctttacggtgttagt
ttactgaatgattgtaaatatggttacgacagtcaaccccagctattaaggctaacctta
ctccgtagccctacttggcctgacccagaagctgacacaggcggcatacacgaatttgct
tatactgtgtatcctcacgctgatagctgggaatcagcccatacagtacaaaagggatat
gaattaaacattcccctgcaagtaatattaaacccaactcaacacttccaactcaacact
tccaaatcaacaccaaacaccagagacaaagcaagttttttaaatttaccagccgagaat
ctggtcttgatggctgtcaaaccatcggaagacgaccagcagcaattaattctgcgcttt
tatgaatctcatggtgtgactacagaattatctttgcagagcgatttaaagttaaccttg
ggtattccagtagatttactggaacgccccattagccaattctcatctgggcaacaaatc
tccacaattgaaccttggaaaattgcgacttttaaagttttagaggtcagaggctag
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