Trichormus variabilis: Ava_4464
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Entry
Ava_4464 CDS
T00277
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ava03032
]
Ava_4464
03400 DNA repair and recombination proteins [BR:
ava03400
]
Ava_4464
Enzymes [BR:
ava01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Ava_4464
DNA replication proteins [BR:
ava03032
]
Prokaryotic type
DNA Topoisomerases
Ava_4464
DNA repair and recombination proteins [BR:
ava03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Ava_4464
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ABA24062
UniProt:
Q3M4M4
LinkDB
All DBs
Position
complement(5587368..5589986)
Genome browser
AA seq
872 aa
AA seq
DB search
MTTSQERIIPTDLRNEMSRSYLEYAMSVIVGRALPDARDGLKPVHRRILYAMHELGLTHD
RPFKKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFSMRSPLVNGHGNFGSVDNDPPAAM
RYTECRLQALTSSALLQDIESETVDFADNFDGSQQEPTVLPSRIPQLLLNGSSGIAVGMA
TNIPPHNLGELIDGVVAVIHNPEITDLQLMQYIHGPDFPTGAQILGMGAIKEAYTTGRGS
ITMRGVANIETIEHRGRPDREAIIITELPYQTNKAALIEKIAELVNEKRIEGIADIRDES
DRDGMRIVIELKRDAYPRVVLNNLYKQTPLQANFGANMLALVNGEPQILTLKQFLNVFLD
FRIESITRRTRYELRKAEERDHLLQGLLIALSHLDAIINLIRSASDTPTAKGELITTYML
SEVQADAILQMQLRRLTALEADKIRLEHEDLQTQIADLQDILARRERILEIIETEITQIK
TSFATPRRTVITHAEGEIDERDLIANEKAIILLTQQGYIKRMPVNTFEAQSRATRGKAAA
KVKDDDTIEHFLTCCDHDSVLFFSDRGVVYCLKAYQIPVSSRTSRGTPIVQLLPIPKEEK
ITSIVPVDEFTSEEYLVMLTKGGNIKKTELAAFSNIRANGLIAISLEEGDQLRWVRRARV
EDSIIIGSRLGMAIHFRCTHEQLRPLGRATRGVKSMKLKKGDELVGMDILPAAILDTLNT
EEPDIDDIETEDIETAVETTEVLETLENLEAVEVSSNASVGPWVLVITMGGYGKRVPVSQ
FRLQNRAGQGLMATKFKNRKTKDKLATLGIVNSDNEIMMVTNRGIIIRQAVNAISIQSRS
ATGVRVQRLDEDDAITGVAIVPPDTGDEEEAE
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgacaacctcacaggagaggattatcccgacggatctgcggaacgaaatgtcccggtct
tatctggaatacgccatgagtgtgatagtgggtagggcgctaccagatgccagggatggt
ctaaaacctgtgcatcgtcgcatcctctacgccatgcacgaattgggtttaacccacgat
cgcccgtttaaaaaatgcgcccgtgtggtcggggaagtgttgggtaaatatcacccccac
ggcgacacagcagtatatgatgccttggtgcggatggcgcaggacttttccatgcgatcg
cccctagtcaacggacatggtaacttcggttctgtagataacgaccccccggcggcaatg
cgttatacagaatgtcgcctacaagccttaaccagttccgccctcctgcaagacatcgaa
tcagaaacagtagattttgccgataacttcgacggttcccaacaagaacccacagttttg
ccatctcgcattccccagttactactaaatggttcttcggggattgctgtgggtatggcc
accaatattccgccccacaacttaggagaattaattgatggggtggtagcagtgattcac
aatccagaaatcactgacttgcaattaatgcaatacatccacgggccagacttccccaca
ggagcgcaaattctggggatgggagcgattaaagaagcctacaccaccggacgcggttcc
atcaccatgcgcggtgtggccaatatcgaaaccattgaacatcggggaagaccagacaga
gaagcaatcatcattactgagttgccatatcaaaccaacaaagccgcactcattgagaaa
atagcggagttggtgaacgaaaaacggattgaaggcattgcagatatccgagatgaaagc
gatcgcgacgggatgcgaattgtcatcgaactcaagcgcgatgcctatccccgcgtagtc
ctcaataacctctataagcaaacgcctctgcaagccaacttcggggccaatatgctggcc
ttggtgaatggcgaaccccaaattctcaccctcaaacaattcttaaacgtcttcctcgat
ttccgcatcgaatctattaccagacgcacccgctacgaactgcggaaagcggaagaacgg
gatcatcttttacaagggttattaattgccctatctcatttagatgccatcattaacttg
attcgcagtgcttccgatacacccacagctaaaggggagttaatcaccacctatatgctt
tcggaagtccaagcagacgcaattttgcagatgcagttgcgccgtttgacagccttagaa
gccgacaaaatccgcctagaacacgaagatttacaaacccaaattgccgacttacaagat
attttggcccggcgggaacggatactggaaatcatcgaaaccgaaatcacccaaatcaaa
accagttttgccacacccagacgtaccgtaattacccacgccgaaggtgaaatagatgag
cgtgacctcatcgccaacgaaaaagcaattatcctcctaacgcaacaaggttacatcaaa
cggatgccggtcaacacctttgaagctcaaagccgtgctaccagaggtaaagccgccgcc
aaagtcaaagacgatgataccattgagcatttcttgacttgttgtgaccatgacagcgtg
ctattttttagcgatcgcggtgtcgtctattgtctcaaagcctatcaaatccccgtgagt
tcccgcaccagtaggggtacacccattgtccaattattacccattcccaaagaagaaaaa
atcacttccattgtccctgtggatgagtttaccagtgaagaatatctggtcatgcttacc
aaaggcggcaacatcaagaaaaccgaattggcagcatttagtaatatccgtgccaatggc
ttgattgccatctccttagaagaaggcgaccaactgcgatgggtacgccgcgccagagtc
gaggatagtatcattatcggttctcgtttaggtatggcaattcactttagatgtacccac
gagcaactccgtcctttaggtagggcaacccgtggagtaaaatctatgaaactgaagaaa
ggcgatgaactggtagggatggatattctgccggcagcaattctcgatacattaaacaca
gaagaaccagacatcgacgatatcgaaacagaagatatcgaaaccgcagtagaaacaaca
gaagtcttagaaaccttagaaaacttagaagctgtagaagtatctagtaatgctagtgtc
ggcccttgggtgttagtcatcacaatgggaggctatggcaagcgcgtaccagtcagtcaa
ttccgtctgcaaaatcgtgctggacaaggtttgatggcgactaaattcaaaaatcgcaaa
accaaagacaaattagccacccttggtatcgtcaacagcgataacgaaatcatgatggtg
accaatcgcggcatcattatacgccaagctgtcaacgcaatttccattcaatcgcgatcg
gcaacaggtgttagagtccaacgcctggacgaagatgacgcaattactggagtagctata
gttccccccgacactggtgatgaggaagaagctgaataa
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