Trichormus variabilis: Ava_4479
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Entry
Ava_4479 CDS
T00277
Name
(GenBank) Glycoside hydrolase, family 13-like protein
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
ava
Trichormus variabilis
Pathway
ava00500
Starch and sucrose metabolism
ava01100
Metabolic pathways
ava01110
Biosynthesis of secondary metabolites
Module
ava_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Ava_4479
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ava04147
]
Ava_4479
Enzymes [BR:
ava01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
Ava_4479
Exosome [BR:
ava04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Ava_4479
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
Alpha-amylase_C
AMPK1_CBM
X25_BaPul_like
Pfc11_Clp1_ID
GlgB_N
DUF5696
Motif
Other DBs
NCBI-ProteinID:
ABA24077
UniProt:
Q3M4K9
LinkDB
All DBs
Position
complement(5610169..5611827)
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AA seq
552 aa
AA seq
DB search
MAKPIEFTLFAPYNKGAALIASFSDWQEIPMQKGDDGYFRATIELEDGTYQYKFRVQTRS
WFFEEDQWVDVTDPYATDIDESSGKDNGIIKIKDGEKIVDTYVWQHDDKPLPADHELVIY
ELHVGDFSGGEDDLYARGKYKHVIEKLDYLCELGINAIELLPVKEYPGDYSWGYNPRYFF
ATESSYGSTADLKKLVDECHQRGIRIIMDGIYNHSEASSPLTQIDHDYWYHHEPRDPDNN
WGPEFNYEHYDENLETYPARKFIGDTVRYWVGEYHLDGIRYDAARQIANYDFMHWIAQEA
KKTAGAKPFYNVAEHIPETTSITNLDGPMDGCWHDSFYHTIKAHICGDTFDLESLKDVID
PKRQGFLGATNVVNYLTNHDHDHIMVELGNREIFHDEAFRRAKLGTAILMTAVGVPLIWM
GEEFGEYKPKQQDQSKIDWTLLGNDLNRSLFDYYRGLIGLRKNNHALYTENIDFIHENPE
AKVLAYSRWNDEGSRVVVVTNFSEDFLAGYHVPNFPSGGTWHEWTGDYDVEAGDDGIITD
IGPYEAKVFVWQ
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcccattgaatttaccttatttgcaccctataacaaaggagcagcattaatt
gcctcattttccgattggcaagaaattcctatgcaaaaaggtgatgatggttattttcgc
gcaactattgaattagaagatggtacatatcaatataaatttcgtgtacaaacaagatca
tggttttttgaagaagatcaatgggtagatgttacagacccttatgctactgatattgat
gaatcaagtggtaaagataatggcatcatcaaaataaaagatggtgaaaaaattgttgat
acatatgtttggcaacatgatgataaacctttacctgctgaccacgaattagttatttat
gaattacacgtaggtgacttttctggtggagaagatgacctttatgcacggggcaaatat
aaacacgttattgaaaagttagattatttgtgtgaattgggcatcaatgccattgagttg
ttaccagtaaaagaatatccaggtgattatagttggggttataatcctcgctatttcttt
gctactgaatccagctatggttctacagctgatttaaaaaaattggttgatgaatgccat
caacgaggtattcgcatcattatggacgggatttataaccactccgaagcatccagtcca
ttaacacaaattgaccatgactactggtatcaccatgaaccacgcgaccctgataataac
tgggggccagagtttaattacgaacactatgatgaaaatttagagacttatccagcaaga
aaatttattggtgatactgtcagatattgggtcggagaatatcatctagatggtattcgc
tacgatgcagcaaggcaaatagccaactacgatttcatgcactggattgctcaagaagca
aagaaaactgccggagcaaaaccattctataatgttgctgaacacatcccagaaaccact
agcattactaatttagatgggccgatggatggatgttggcatgatagtttttaccacacc
attaaagctcatatatgcggtgacacctttgatttagaaagtctcaaagatgtcattgac
cctaaacgccaaggtttcttgggtgcaactaatgttgtgaactatctcaccaaccatgac
catgaccatatcatggtggagctaggtaatcgagaaatttttcacgacgaagcttttaga
agagctaaactgggaactgcaattttaatgacagctgttggtgtacctttgatttggatg
ggagaagaattcggcgagtataaacccaaacaacaagaccaatctaaaattgattggaca
ctcttaggtaatgatctcaatcgtagtttgtttgattactacagaggattgataggttta
cgtaagaataatcacgcgttgtatacagaaaatattgatttcatccacgaaaatccagaa
gccaaggtgttagcctacagccgttggaatgatgaaggttctcgtgtggtagtggtgacg
aatttctccgaagacttcctcgccggttatcatgtccctaatttcccctctggtggtaca
tggcatgagtggactggcgactatgatgttgaagctggtgatgatggtatcatcactgat
atcgggccttatgaagctaaggtatttgtttggcagtaa
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