Trichormus variabilis: Ava_4511
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Entry
Ava_4511 CDS
T00277
Name
(GenBank) Hemolysin A
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ava03009
]
Ava_4511
Enzymes [BR:
ava01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
Ava_4511
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
Ava_4511
Ribosome biogenesis [BR:
ava03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Ava_4511
23S rRNA modification factors
Ava_4511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
ABA24109
UniProt:
Q3M4H7
LinkDB
All DBs
Position
complement(5655978..5656796)
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AA seq
272 aa
AA seq
DB search
MAKQRLDNLLVELNLCNSRTLAQRLIQAGEVTVNEQVIDKPGTEVDVAAQIKIKERSRFV
SRGGEKLAKGLELFAISVNGRVCLDGGISTGGFTDCLLQAGAKLVYGIDVGYGQTDWGLR
NNPQVILRERTNLRQLQPEDLYGDGDAIPDLAVVDVSFISLTKILPALWQLTQPPREAVL
LVKPQFEVGKSRVGKKGVVRDPHDQADAIFQVWQAADKLGWKYKGLTWSPITGPAGNIEY
LLWLNMESETPPPDLNAIQQVTQLAMTDIKSG
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaacagcgactagataatttattagtagagttaaacttatgtaattctcgcact
ttagcacagaggctaattcaggcgggggaagtgactgttaatgaacaggtaattgataag
ccggggacagaggttgatgttgcggctcagattaaaattaaagagcgatcgcgctttgtt
tcccgtggtggtgagaaactggctaagggtttggaattattcgccatctctgtaaatggg
cgtgtttgcttggatgggggcatatctacgggtggttttactgattgtttactccaagct
ggggcaaagctagtttacggtatcgatgtgggttacgggcaaaccgattggggtttacga
aacaatcctcaggtgattttgcgcgaacgtactaatttacgtcaattgcaacctgaagat
ttatatggtgatggggatgctatccccgatttggcagtggtggatgtttcttttatttcc
ttaactaagattttgccagccttatggcaattaactcaacccccacgagaagccgtgcta
ttggttaagccacagtttgaggtgggaaaatctcgtgtgggtaaaaaaggcgttgttcgc
gatccccacgaccaagctgacgctatttttcaggtgtggcaagcggctgataaattaggc
tggaagtataagggcttaacttggtcaccgattactggcccggcgggaaatatcgaatat
ctcctatggttgaacatggaaagcgaaacgccaccaccagatttaaatgcgattcaacaa
gttactcaattggctatgactgatatcaagtcgggttaa
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