Trichormus variabilis: Ava_4540
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Entry
Ava_4540 CDS
T00277
Name
(GenBank) Twin-arginine translocation pathway signal
KO
K15576
nitrate/nitrite transport system substrate-binding protein
Organism
ava
Trichormus variabilis
Pathway
ava00910
Nitrogen metabolism
ava02010
ABC transporters
Module
ava_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
Ava_4540
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ava_4540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ava02000
]
Ava_4540
Transporters [BR:
ava02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Nitrate/nitrite transporter
Ava_4540
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Ortholog
Paralog
GFIT
Motif
Pfam:
NMT1_2
NMT1
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ABA24138
UniProt:
Q3M4E8
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All DBs
Position
5691895..5693217
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AA seq
440 aa
AA seq
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MTHVSRRKFLFTTGAAAAASILAHGCTSNGSQSATTGEQAPSAAPAANVSAANAPKVETT
KAKLGFIPLTDAAPLIIAKEKGFFAKYGMTDVEVIKQKSWPVTRDNLKIGSSGGGIDGAH
ILSPMPYLMTIKDKVPMYILARLNTNGQAISVAEKYKDLNINLESKNLKDVAAKAKADKK
AWKAGITFPGGTHDLWMRYWLAAGGINPDQDVVLEPVPPPQMVANMKVGTVDSFCVGEPW
NAQLVNQKLGYSALVTGELWKDHPEKAFTMRQDWVDQNPNAAQAILMAILEAQQWCDKAE
NKEEMCKICADRKYLNVAAADIVERAKGNIDYGDGRKEENFAYRMKFWADNASYPYKSHD
IWFLTEDIRWGYLPKDTKVQDIVNQVNKEDLWKKAAKAIGVADAEIPASSSRGVETFFDG
VKFDPEKPEEYLNSLKIKKV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgacacacgtttccagaagaaaatttcttttcaccacaggtgcggcggcggcggcttct
attttggctcatggttgcacttccaatggttctcaatcagctaccaccggagaacaagca
ccttcagcagcaccagccgctaacgtctcagccgctaacgcacccaaggtagaaacaacc
aaagccaagctaggattcatcccgcttactgatgctgcacccctcatcattgctaaagag
aaaggcttctttgctaaatatggcatgaccgatgttgaagtcatcaagcaaaaatcttgg
cctgtcacccgcgataacttaaaaattggctcatctggtggtggtattgatggcgcacat
atccttagtcccatgccttacctcatgaccatcaaagataaagtgccaatgtacattttg
gctagattaaatactaatggccaggctatttctgtagctgaaaaatataaagacctgaac
attaatttagaaagcaaaaaccttaaagacgtagccgccaaagccaaagctgataagaaa
gcctggaaagctggtattacctttcctggtgggacacatgatttatggatgcgctattgg
ttagcggctggtggtattaatcctgatcaagatgttgtgttggaacctgttccaccgcca
caaatggtagcaaacatgaaagttgggactgtcgattccttctgtgttggagaaccttgg
aatgctcagttagtcaaccaaaaattaggttattccgctttagttacaggcgaattatgg
aaagatcatccagaaaaagcctttaccatgcggcaagattgggttgatcaaaatcccaat
gcagcccaggcaattttgatggcaattttagaagcacaacaatggtgcgacaaggcagaa
aacaaagaagaaatgtgtaaaatctgcgctgaccgtaaatacttaaatgttgctgccgca
gatattgtagaaagagctaaaggcaatatcgattatggtgatggtcgtaaggaagaaaac
tttgcttatcggatgaaattctgggcagataatgcttcctatccctataagagtcacgat
atttggtttttaactgaagatattcgctggggttatttaccaaaagatactaaagttcaa
gacattgttaaccaagttaataaagaagacttgtggaagaaagcagcgaaagcaattggt
gtggctgatgcggaaattcctgctagcagttcccgtggggtggaaactttctttgatggc
gtgaaatttgacccagaaaagccagaagaatacttaaatagtttgaaaatcaaaaaagtt
taa
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