Trichormus variabilis: Ava_4578
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Entry
Ava_4578 CDS
T00277
Name
(GenBank) Transposase, IS891/IS1136/IS1341
KO
K07496
putative transposase
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Ava_4578
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Gene cluster
GFIT
Motif
Pfam:
OrfB_IS605
Cas12f1-like_TNB
Zn_Tnp_IS91
zf-KKT2_KKT3
Zf_2nd_IFT121
DUF4379
DUF1451
Motif
Other DBs
NCBI-ProteinID:
ABA24175
UniProt:
Q3M4B1
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Position
5733273..5734496
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AA seq
407 aa
AA seq
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MIVYEAKAEATKEQFLKVNEALRTALFVRNSCLRYWLDGHAKNGYDLNKYTKVLSDNPEF
PWVSKLNSTARQAMAERAWAAIARFFDNCKNKVTFKKGFPRFRKLQTRASVEYKKSGWVL
SQCRNYITFTDKFCIGAMKLRGTRDLNYYQLKQIKRVRIVRRADGIYIQFCIDHERKEQL
EPTGKSLALDLGLTHFYTDSDGNKVENPRFLRKSEQALKKVQRRLSRCAKGSTNRARARN
RLGRKHLKLQRQRQDWCIKKALSVIKSADLVVFENLQVRNMLKNHNLAKSISDASWSIFT
QWLEYFGKIYGRVVVAVSPAYTSIDCSNCGHQVHKTLSTRTHSCPNCSYTACRDYNASRN
ILNKGLELFKNTAGQAGIQHASGEFDLCSEKATSKSKSSQRKRKISQ
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatagtctacgaagcaaaagcagaagcaacaaaagagcagtttctcaaagtaaatgaa
gctttgaggactgctctttttgtgcgtaattcttgcttgcgctattggttggatggtcat
gcaaagaacggttatgatttgaataaatacacgaaagttctgtcagacaatcctgaattt
ccttgggtatcaaagttgaactcaacggcaagacaggcaatggcagaacgtgcctgggca
gcaattgcacgcttttttgataactgtaaaaataaggttactttcaagaaaggatttcct
cgttttcgcaagctccaaactagagcatctgtcgaatataaaaaaagtggttgggtgcta
tcccagtgccgtaactacataacattcacagataagttttgcattggagctatgaaacta
aggggaactcgtgacctaaattactatcaattaaaacagataaaacgggttaggattgtg
cgtcgtgcagatgggatatacatccaattctgcatcgaccacgaacgaaaagagcagcta
gaacctacaggtaaatctcttgctcttgaccttggactcactcatttctatacagatagt
gatggcaacaaagttgagaatccccggttcttacgcaaatcagaacaggcactaaaaaag
gtacaacgcagattatctcgttgtgccaaaggttctacaaatcgtgccagagcacgaaac
agattagggagaaaacacctgaaattgcaacgccagcgtcaagattggtgcattaagaaa
gcattaagcgtaattaagtcggcagacttagtggtgtttgagaatttgcaggtgcggaat
atgctcaagaatcacaatctggcgaaaagtatttccgatgccagttggagtattttcact
caatggttagagtatttcggcaaaatatatggacgagtagtggttgctgtgtcacctgcg
tacacgagtattgattgctcaaactgtgggcatcaagttcacaaaactctcagcaccagg
acgcacagttgccctaattgttcatacaccgcttgtcgagattacaatgccagtcggaac
atccttaacaaaggattagaactgtttaaaaatactgctgggcaggcaggaattcaacac
gcctctggagagtttgacctctgctcggagaaggcaacttctaagagtaagtcatctcaa
agaaagaggaaaatctcacagtga
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