Trichormus variabilis: Ava_4596
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Entry
Ava_4596 CDS
T00277
Name
(GenBank) NADH ubiquinone oxidoreductase, 20 kDa subunit
KO
K23548
uptake hydrogenase small subunit [EC:
1.12.99.6
]
Organism
ava
Trichormus variabilis
Pathway
ava00633
Nitrotoluene degradation
ava01120
Microbial metabolism in diverse environments
ava02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
Ava_4596
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ava_4596
Enzymes [BR:
ava01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
Ava_4596
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Motif
Pfam:
Oxidored_q6
NiFe_hyd_SSU_C
Motif
Other DBs
NCBI-ProteinID:
ABA24193
UniProt:
Q3M493
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All DBs
Position
complement(5751917..5752879)
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AA seq
320 aa
AA seq
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MTNVLWLQGGACSGNTMSFLNAEEPTVCDLIADFGIKVLWHPSLGLELGDNVQTLLWDCI
LGKIPLDILVFEGTVVNAPNGTGEWNRFADRPMKDWLNDLAQAASFVVAVGDCATWGGIP
AMEPNPSESQGLQFLKRKEGGFLGKDFRAKSGLPVINIPGCPSHPDWITQILVAIATGRI
GDIALDELNRPQTFFNTFTQTGCTRNVHFAYKATTAEFGQRKGCLFYDLGCRGPMTHSSC
NRILWNRVSSKTRAGMPCLGCTEPEFPFFDLKPGTVFKTQTIMGVPKELPPGVSNKNYAV
LTMVAKDTAPKWAEEDFFTV
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgtactctggctgcaaggtggtgcttgttcaggcaacaccatgtcttttctt
aatgccgaagaaccgacagtatgcgatttaattgctgattttggtatcaaggtactttgg
catccttccttaggactggaactaggcgacaacgtacaaaccttactgtgggattgcatc
ttaggcaaaatacctctagacattttggtctttgaaggtactgtagttaatgcccccaac
ggtacaggcgaatggaaccgttttgccgatcgccccatgaaagattggttaaatgacctc
gcccaagctgctagttttgtcgtcgccgtgggagactgcgccacttggggaggaatcccc
gcaatggaaccaaaccccagcgaatcacaaggcttgcaattcctcaaacgtaaggaaggc
ggctttttaggtaaagatttccgtgccaaatcagggctaccagtaatcaatatccccggt
tgtccatctcaccccgattggattacgcagatattagtggcgatcgctaccggacgtata
ggagacatcgccctcgatgaactcaaccgcccccaaaccttcttcaacaccttcacccaa
accggctgtacccgtaacgtccacttcgcctacaaagccaccaccgccgaatttggacaa
cgcaaaggctgtctattctacgacttaggttgtcgcggccccatgactcattcttcctgc
aaccgcatcctctggaaccgcgtctcctccaagacccgcgccggaatgccctgtttaggt
tgcacagaaccagagttccccttcttcgacctcaaacccggaaccgtatttaaaacccag
accatcatgggagtacccaaagaactaccaccaggggtaagcaataaaaactacgctgtc
ctcacaatggttgctaaagacacagcccccaaatgggcagaagaagacttttttacagtt
tag
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