Trichormus variabilis: Ava_4616
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Entry
Ava_4616 CDS
T00277
Name
(GenBank) glycogen branching enzyme
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
ava
Trichormus variabilis
Pathway
ava00500
Starch and sucrose metabolism
ava01100
Metabolic pathways
ava01110
Biosynthesis of secondary metabolites
Module
ava_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Ava_4616
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ava04147
]
Ava_4616
Enzymes [BR:
ava01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
Ava_4616
Exosome [BR:
ava04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Ava_4616
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
GlgB_N
Alpha-amylase_C
Alpha-amylase
DUF4331
KH_9
Motif
Other DBs
NCBI-ProteinID:
ABA24213
UniProt:
Q3M473
LinkDB
All DBs
Position
complement(5773719..5776013)
Genome browser
AA seq
764 aa
AA seq
DB search
MPMTTIAPEQVNRIVWNQHHDPFEILGSHPIEQNGKNVWVVRAYLPNASAAWVVLPEQRQ
EYAMQTVHDPHFFECIIETSELSNYQLKTKEGEHERVSYDPYAFRSPRLTDFDLHLFAEG
NHHRIYEKLGAHFTEVDGVTGVYFAVWAPNARNVSVLGDFNLWDGRKHQMRKGATGVWEL
FIPEIGVGEHYKYEIKNFAGHIYEKSDPFGFQQEPRPKTASIVSNLNSYNWSDENWLEQR
RHTDPLTQPISVYEVHLGSWLHAASAEPAKLPNGETEPVVIASELNPGARFLTYRELASR
LIPYVKELGYTHIELLPIAEHPFDGSWGYQVTGYYAPTSRFGTPEDFMYFVDQCHQNNIG
VIVDWVPGHFPKDGHGLAFFDGTHLYEHADSRKGEHKEWGTLVFNYSRNEVRNFLVANAL
FWFDKYHIDGIRVDAVASMLYLDYCRKEGEWLPNQYGGRENLEAADFLRQVNHLLFSYFP
GVLSIAEESTDWPMVSWPTYTGGLGFNLKWNMGWMHDMLDYFSMDPWFRQFHQNNVTFSM
WYNHSENFMLALSHDEVVHGKSNIIGKMPGDKWQKLANVRCLFAYMFAHPGKKTMFMSME
FGQWSEWNVWADLEWPLLQFEPHQQLKKFFTELNKLYRSEPALYTLDFAREGFDWIDCSD
NRHSVVSFIRREKDTENFVVVVCNFTPQPHSHYRIGVPEKGFYTELFNSDARQYGGSNMG
NLGGKWTDDWSMHSRPYSLDLCLPPLGVLILKMDKEKTAKASGS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgaccacgatcgctcctgaacaggttaaccgcatcgtctggaaccagcatcat
gatccttttgaaatcctcggttctcatcccatagaacaaaacggcaaaaacgtttgggtt
gtgagagcctacctaccaaatgccagtgcagcatgggtcgttcttccagaacaacggcaa
gaatacgccatgcagacggtgcatgatccacacttttttgaatgtattattgaaacttcc
gaactatcaaactaccagttaaaaactaaagaaggagaacatgagcgtgtttcctacgat
ccttacgcttttcgttcccctcgtttaacagactttgacttacatttgtttgctgaaggt
aatcaccatcgcatttacgaaaaactgggagcgcatttcacagaagtagatggcgttaca
ggtgtttactttgcagtctgggcccccaatgctcgaaatgtctctgttttgggagatttc
aacctctgggatggacgtaaacatcagatgcgtaaaggcgctactggcgtttgggaatta
ttcattcccgaaatcggggtaggggagcattacaaatacgaaatcaaaaattttgcaggg
catatttatgaaaaatccgaccccttcggttttcaacaagaaccccgccccaaaacagcc
tcaattgttagtaacttaaattcatacaactggagtgacgaaaactggttagaacagcgc
cgtcatacagatcctttaacccagccgatttcagtttatgaagtacacctgggttcttgg
ttacacgctgctagtgcagaaccagctaaactacctaatggtgaaactgagcctgtagtc
attgcttcagaactcaatccaggcgcacgttttttaacatatcgggaactagccagcaga
ctcattccctatgttaaagaactaggatatacccacatagaattattaccaatcgccgaa
catccttttgatgggtcttggggttatcaggtaacaggatactacgcccctacttcgcgt
tttgggactcctgaagactttatgtattttgttgatcagtgtcaccaaaacaacatcggt
gtaattgtcgattgggttcctggtcacttccccaaggatgggcatggtttagccttcttt
gatggtactcacctatatgaacacgccgactcccgtaaaggtgaacataaagagtggggg
actctggttttcaattatagccggaacgaagtccgcaactttttggtagcaaatgccctg
ttctggtttgacaaataccacatagatggtattcgtgttgatgcggtggcttccatgctt
tatctcgactactgtcgcaaagagggcgaatggttgcctaaccagtacggtggtagagaa
aatctagaagcagcagattttctgcgtcaggtaaatcacttgctttttagctattttcct
ggtgtgctttccattgcggaagaatccacagattggccgatggtgtcttggcctacctac
acaggtggtttaggatttaacctcaagtggaacatgggctggatgcacgatatgctggat
tatttcagcatggacccttggtttaggcaattccaccaaaacaacgtcacctttagtatg
tggtataaccacagtgagaacttcatgctggctctatcccatgatgaagtcgtacatggt
aagagcaatatcatcggtaaaatgcctggtgataagtggcagaagttggcaaatgtgcgt
tgtctgtttgcctatatgtttgctcacccaggtaagaaaaccatgtttatgagcatggaa
tttgggcaatggagtgagtggaatgtttgggctgacttggagtggcctttgttacagttt
gaaccacaccaacagttgaaaaaattcttcactgaactgaataaactttaccgttctgaa
cctgctttatacactttagattttgctagagaagggtttgattggattgattgtagcgat
aatcgccacagcgtagtctcgtttattcgccgtgaaaaagatactgagaatttcgttgtg
gtggtttgtaacttcacaccccagcctcattctcattaccgtattggtgtcccagaaaaa
ggtttttacaccgagttattcaatagtgatgctcgtcagtatggcggtagcaacatgggt
aacttaggtggtaagtggactgatgattggtcgatgcacagtcgcccctattcactggat
ttatgtttaccacctctgggagttttgattttgaagatggataaggaaaaaacggctaaa
gcatcaggttcttaa
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