Trichormus variabilis: Ava_4620
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Entry
Ava_4620 CDS
T00277
Name
(GenBank) Penicillin-binding protein, transpeptidase
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
ava
Trichormus variabilis
Pathway
ava00550
Peptidoglycan biosynthesis
ava01100
Metabolic pathways
ava01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ava_4620
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Ava_4620
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ava01011
]
Ava_4620
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ava03036
]
Ava_4620
Enzymes [BR:
ava01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Ava_4620
Peptidoglycan biosynthesis and degradation proteins [BR:
ava01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Ava_4620
Chromosome and associated proteins [BR:
ava03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Ava_4620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
ABA24217
UniProt:
Q3M469
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All DBs
Position
5778863..5780692
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AA seq
609 aa
AA seq
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MQKSPSRLKFRKFQKPEFTRRKRVPQKVAMKTIAPNTQEPLTSAKTRLLIVWGILMTAGL
GLAINVYNLQILQGAKLTERARNQQMVSLRPYMPRRLVVDRNDNVLAVDRPVYTLYAHPK
LFKKTNEEISDRLAPIIDRNPADLVKIFQGRKSGITLTSSLPEELAERVRKLSLDGLEMI
PKYSRYYPQDDLVADVVGYVDVDRRGQAGVERSQEKWLERSVKTIRLSRAGNGALMPDYA
PEGFLNSDDLRMQLTIDSRLQRATRNALKEQLEKFGGKRGAVIVMDAMDGSILALASQPT
YNPNEYSKADISLFKNWTVADLYEPGSTFKPLNVAIALENGVIKADDVFNDSGAIRIGSH
TIRNAQRNGYGRINIAQILQNSSNIGMVQMIQRLKPSIYYNWLERLGLGQPVDTDLPFAV
SGTLKSQEKFIHSPIEPATTSFGQGFSLTPLQLVQMHGALANGGKLVTPHVVRGLIDTKG
QIHYTPNHPAPRQIFSAATTQKVVEMMETVVTEGTGKVAQIPGYRIAGKTGTAQKASPNG
GYIVGARITSFVAILPVESPRYVILALVDEPKGANAYGSTVAAPIVKSVMEALIPIERLA
PSQPIEEKP
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagtcaccaagtagattgaagtttagaaagtttcaaaagccggagttcaccagg
cgcaaaagggtaccgcaaaaggtggcaatgaagacaatcgcccccaatacccaagagcca
ttaacaagtgccaaaaccagacttttgattgtctggggcatattaatgactgctggactg
gggttggcaattaatgtgtataacttgcaaattttgcagggagcaaaactgacagaaaga
gcgcgaaaccaacaaatggtaagcttgcgcccctatatgcctcgccgcttggtggtggat
cgcaatgataatgtgttggctgttgaccgccctgtctatactttatatgcccaccctaag
ctatttaaaaagacgaacgaagaaataagcgatcgcctagctcctattattgatagaaac
cctgctgatttagtcaagatttttcaaggtcgaaaaagtggtattactttgacctcctct
ttaccagaggaactggccgagcgcgtcaggaaattaagcttagatggcttggaaatgatt
cccaaatattcccgctattatccccaggatgatttagtggcggatgtagtgggatatgta
gacgttgaccgtcgtggtcaggcgggtgtggaacgtagccaagagaaatggctagaacgt
tctgtgaaaacaatacgcttaagtagggcgggtaatggggctttgatgcctgattatgct
cctgaaggttttttaaattctgatgatttgcggatgcaattgactattgacagtcgtttg
caaagggctaccaggaatgcgctgaaagaacagctagaaaagtttggcgggaaacgagga
gcagtgattgtgatggatgcgatggatggctctatcctcgctttggcatctcaacctact
tataacccgaatgaatactcgaaagcggatatttcgctgttcaaaaactggacggtggct
gatctctatgagcctggttcgacatttaaaccattgaatgtggcgatcgctctggaaaat
ggcgtaatcaaagcagatgatgtgtttaatgattctggtgcaattcgcatcggttctcat
acgattagaaacgctcaacgcaacggttacggacgcatcaatattgctcaaattctccaa
aactccagcaatattggcatggtgcaaatgatccaacgcctaaagccttcgatttactac
aattggctggaacgtttaggactgggacaaccagtagatacagatttaccttttgcggtc
agtggcacactcaaaagccaagaaaaatttattcactcccccattgaaccggcaacaact
tcttttggacagggcttttccttaacacccttacaattagtgcagatgcacggtgcctta
gctaacggtggtaaattggtgacacctcatgttgtccggggactaattgatactaaagga
caaatccactacacacccaatcacccagcaccaaggcaaattttctcagccgcaacgacc
caaaaagttgtggaaatgatggaaacggtagttacagaaggtactggcaaggttgctcaa
atccctggctatcgcatcgccggcaaaacaggtacagcccaaaaagccagtcctaacggc
ggctacatcgttggcgctcggattactagctttgttgctattttacccgttgaatcgccc
cgctatgtaattttggccttagttgatgagccaaaaggagccaacgcctacggttcaact
gtcgcagccccaattgttaaatccgttatggaagcactaattcccattgaacgcttagca
cccagccagccaattgaggaaaaaccttaa
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