Trichormus variabilis: Ava_4701
Help
Entry
Ava_4701 CDS
T00277
Name
(GenBank) multi-sensor hybrid histidine kinase
Organism
ava
Trichormus variabilis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF
CBS
HATPase_c
Response_reg
HisKA
PAS_3
GAF_2
GAF_3
Plasmod_MYXSPDY
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ABA24298
UniProt:
Q3M3Y8
LinkDB
All DBs
Position
5874401..5878225
Genome browser
AA seq
1274 aa
AA seq
DB search
MFNCTTSLTQSELKSAIIRDPLIIKPETTVMDAIAQMSAVRAICDTDKLDEVHLEARSSC
VLIVEAGRLLGIFTERDVVRLCSQRRCLENLAIREVMIHPVVSLHESEFTDLFFAVNLLQ
QYRIRHIPILDEEERVVGLLTNESLRQTSRSVDLLRLRLVSEVMTCEVICAAPDSSMLAI
AQLLTENRVSSVMIVQLCECPANPQKIPVGIVTERDIVQFQALGLNLETCQVQTVMSTPI
FAVRPDYSLRFVQQIMEQRLIRRLAVTGEQGELLGIVTQSSLLQALNPLEVYKLAQMLEE
RVVRLETEKVQLLENRTVELEQQVADRTASLKAKAGREQILSDISRQIRSSLSLQTILDT
TVEQVRQLLGCDRVNIWHFEAEWESIVMAESTTSSRSLLGKRIQEICFQQRCAELYRYGR
IRIVPDIYTTEMTDCHRELLIRLQTRAKILVPLLCGDELWGLLNVTESQHAREWQTEEIE
LLQGLSVHLAIAIQQATTHQKLQEQLIALQEGSDRLQESEQRYIALNQNLEAKVEERTAE
LQAREAQLQKISERLALSLKSAAIGCWDWDIGENTIFWDERMYELYGVTKTTDSRLVYDT
WANGLHPDDRTNTEILVQQAVLGQAEYDTEFRVIHPDGSIHFIKAYGVVVRDAEGNPQKM
IGVHFDISDRKKAEEIIRQQAEREKLLREITQRIRQSLDLQTIFDIACQDIRQVIQADRV
GIFKFYPESNFNDGEFVAESVVDEFPSVIAIRVHDQCFGENYSSLYALGRSYVVDDIYNS
DMTTCHTDILAQFHVRANVIMPLLCGAELWGLLCIHQCATTRHWEQSEIDFTQQLATQLA
IAIQQASLVEQLQQELAERQQAELKLTQSNQQLAISNQELARATRLKDEFLANMSHELRT
PLNAILGMTEGLQEGVFGMINDKQFKALETIERSSSHLLDLINDILDVAKIEAGQIKLDC
TAISVAALCQSSLVFIKQQALQKRIQVEIKIPLNLPDLFVDERRIRQVLINLLNNAVKFT
PETGRISLEVTQVSPDISTVQNFLQIAVIDTGIGIMQENINKLFQPFIQIDSALNRQYEG
TGLGLALVKKIVELHGGRVGLTSELGVGSCFTIELPCTPSTPSSPELIRDLLTTPNSELD
FANAEEAASLAPVILLAEDNEANIKTFSSYLSAKGYGILLATNGEQALELATIHQPDLIL
MDIQMPGIDGLEAIRQIRLDPELVNIPIVALTALAMTGDRDRCLQAGANDYLTKPVKLKQ
LATTIQQLLMETKK
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgcacaacgtctctcacccaatcagaactgaaatcagcgatcattcgtgat
cccctgatcatcaaaccggagacaacggtgatggatgcgatcgcccaaatgagtgccgtg
cgggctatctgtgatacagataaactggatgaagtccatctagaggcacgatcaagctgc
gtgttgatagtggaagctgggagactattaggtatcttcacagagcgggatgtagtcaga
ctgtgtagccagaggcgttgtttggagaatttggcgattcgagaggtgatgattcaccca
gttgtcagcctgcatgagtctgagtttaccgatttgttttttgctgttaatttgcttcaa
cagtaccgtattcgccacatccctattctagacgaggaggagcgggtggtggggctgcta
accaatgaaagtctacggcaaacttctcgctctgtggatctgttgcggttgcgtctggtg
tcggaggtgatgacctgtgaggtgatttgtgctgcaccagatagttctatgttggcgatc
gcccaactcttgacagagaaccgtgtcagttccgtgatgattgtgcaactttgtgagtgt
ccagccaacccccaaaaaattccggtgggaattgtcaccgagcgggatattgtccagttt
caggcattaggcttgaatctggaaacctgtcaggttcagacggtgatgagtacgccgatt
tttgccgttagaccagactattctctgcggttcgtacagcagataatggagcagcgtttg
attcgtcggttggcagtgacaggagagcagggggagttattaggcatcgttacccaaagt
agtttactgcaagcccttaaccctttagaggtatacaaactagcccagatgttggaagaa
cgggtggtgaggttagagacagagaaggttcaactgctggaaaatcgcactgttgagcta
gagcagcaagttgcagatcggacagctagcctcaaggctaaggcaggtcgggaacagatt
ttgtctgatatctccagacaaattcgctcttctctcagtttacaaaccattctggataca
accgtggagcaggtgcggcaattgctgggttgcgatcgcgtcaacatttggcattttgaa
gcagagtgggaaagcatcgtgatggcagagtctaccacatcttccagatcattactgggc
aaacggattcaggaaatctgctttcagcaacgctgcgcggagctttatcgctatgggcgg
attcgcatcgtcccagatatctacaccacagaaatgacagactgtcaccgggagttgcta
atccgcctccaaacgcgagccaaaattttagtacccctgctgtgtggcgatgaactgtgg
ggtttgctcaatgtcaccgaaagccagcacgcccgcgagtggcaaactgaagaaatcgaa
ctgctgcaagggttatctgtacatctggctatcgccattcagcaagctactacccaccaa
aaattgcaggagcaactaatcgcccttcaggaagggtcagatcgactacaagaaagcgaa
cagcgttatatcgccctcaatcaaaacctagaagctaaagttgaagaacgcacggctgaa
ctccaagcacgagaagcacaactccagaaaatatccgagcgcctggctttgtccctcaaa
tctgcggccatcggctgttgggactgggatattggtgagaacaccatcttttgggatgag
cggatgtacgaactctatggtgttaccaaaacaactgattcacgtttagtctacgacact
tgggcaaatgggctacatcctgatgaccgcaccaatacagaaatattagtccagcaagca
gttttaggacaagcagaatacgatactgaatttcgtgtcatacatcctgatggcagtatc
cacttcatcaaagcctatggtgtggtggtgcgagatgctgagggtaatccccagaaaatg
attggagtccactttgatattagtgatcgcaaaaaggctgaggaaattattcgccaacag
gcagaaagagagaaactgctgcgagaaattacccagaggattcgtcaatccctagacctc
cagaccatttttgacatcgcttgccaggacatccgtcaagtgattcaggctgatcgggtg
ggcattttcaagttctatcccgaatccaactttaatgacggcgaatttgtggctgaatct
gttgtagacgagtttccctcagtcatcgcaattcgggtacacgaccagtgctttggggaa
aactattcctctctctacgctttgggcaggtcttatgtggttgatgatatctataacagt
gacatgacaacctgccacactgatatcttggctcagtttcatgtgcgtgccaatgtgatt
atgcccttactttgcggtgctgagttatggggtttgctgtgcattcatcagtgcgcgaca
actcgccactgggagcagtcagaaattgattttacccaacaacttgccacccagttagcg
atcgccattcaacaagcaagtctggttgagcaattacagcaagaactggccgaaagacaa
caggcagaactcaagctcacccagagtaatcaacaactagccatttctaaccaagaactc
gcccgtgctactcgcctcaaagatgaattcctggctaacatgagccacgaactccgcacc
cccctcaacgccattctcggcatgaccgaagggttacaagaaggagtttttggcatgatc
aacgataaacaattcaaagccttggaaaccattgagcgtagcagctctcatttactggat
ttgatcaacgatattctcgatgtagcgaaaattgaagccggacagatcaaactagattgc
actgcaatttcagtagcggctctgtgtcaatccagtctggtatttatcaaacagcaagca
ttgcaaaaacggattcaagtggaaatcaaaattccgctcaatttacctgacctgtttgtt
gatgaacgccggattcgtcaggtgttaattaacctgctcaataatgcggtcaaattcacg
ccggagacaggacgcatttccctagaagttacccaagtttcccccgatatatccacagtg
cagaactttttgcaaattgccgtgatcgatacaggcattggcattatgcaggagaatatc
aacaagctatttcagcccttcatccaaattgatagcgcattaaatcgtcaatatgagggt
acaggcttgggattggcattggtgaaaaaaattgtcgaactccacggtggtagggtgggt
ttaaccagtgagctgggtgtaggcagctgcttcacaattgaactaccttgtactcccagt
actccctcatcacccgaactaattcgggatttattaactacccctaattcagaactggac
tttgccaatgctgaagaagccgcaagccttgcccctgtaatcttgctagccgaagataat
gaagccaatatcaaaacattttctagctacctcagtgccaaaggctatggcattttgtta
gcaacaaatggtgaacaagccctagaactggccacaatccaccagcccgacttgattttg
atggatatccaaatgccgggaatcgacggtctagaggcaatccgacagattcgccttgat
cctgagttggtgaatattcccattgtggcactcacggccctggcaatgactggcgatcgc
gatcgctgtttacaagcaggagccaatgactacctgactaaaccagttaagctcaagcaa
ctggccaccaccattcaacagcttttaatggaaacaaaaaaatga
DBGET
integrated database retrieval system
