Trichormus variabilis: Ava_4753
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Entry
Ava_4753 CDS
T00277
Name
(GenBank) PAS/PAC sensor hybrid histidine kinase
Organism
ava
Trichormus variabilis
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
PAS
PAS_9
HisKA
PAS_8
PAS_4
HPTransfase
PAS_3
Adaptin_N
PAS_11
Diguanyl_cycl_sensor
MLTR_LBD
Motif
Other DBs
NCBI-ProteinID:
ABA24350
UniProt:
Q3M3T6
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Position
5978948..5980840
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AA seq
630 aa
AA seq
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MNQSLVRVLLVDDGESDYILTCNWFSEFRVANCELEWVDNYEAAKVAIANNQHDIYLVDY
RLGSRSGLELLREAIADGCTSPIILLTGQGDAEIDIEAMKAGAVDYLEKNQLNAPLLERS
ILYAIERKQIEKKIREQAALLDIANDAIFVQDLDGNVLFWNEAAARLYGWQKAEAINNKI
QNLWQEKNLALLQKSLNELQQKGSWKGELYQTTKSGREIIVESRWTLVHEFGNKSQCILV
VNTEITQKKQLEAQFLRAQRLESIGTLASGIAHDLNNVLAPILMTAQLLESQIKDERSQR
LLPILITNAKRGANLVKQVLSFTRGLEGERTLLQLKHLVGEIQQIIKETFPKSIELAAHI
SQNLWTVSGDATQLHQVLMNLCVNARDAMPKGGTLKITAENFLIDENYARMNIDAKVGPY
VVVTVTDTGIGISSDILDRIFEPFFTTKELGKGTGLGLSTVLGIIKSHGGFINVYTEEGE
GSQFKVYLPAQDTKELLEEAALELSPGNGELILVVDDEAAIRDITKTSLESYNYKAITAS
DGIEAIALYAERQDEISLVLTDMVMPSMDGLTTIRTLQKINPLVKIIAVSGLAAHDKVNA
AYNMGIQAFLSKPYTANQLLKTINAVQHKN
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaagtttagtcagagtgctattggttgatgatggtgaaagtgattacatctta
acttgtaattggttcagtgaatttcgggtagctaactgcgagttagaatgggtagataat
tatgaagcggcaaaagtagcgatcgccaacaatcagcatgatatatatttagtagactat
cgtttaggctcccgcagtggactagaactgttacgtgaagcaattgccgatggctgcacc
tctccgataattttgctcacaggtcaaggagacgcagaaatagatatagaagccatgaaa
gccggagcggtagattatctagaaaagaaccaactgaatgcacctctcctagaacgttct
attctctatgctatcgagcgtaaacaaatagagaaaaaaattcgtgaacaagcggcgctt
ttggatattgccaatgatgccatttttgtacaagatttggacgggaacgttttattctgg
aacgaagcagcagcaaggctttacggttggcaaaaagcagaagcaattaacaataaaatt
caaaacctctggcaagaaaaaaacttagccttattgcaaaaatcgctgaatgaactacag
caaaaaggttcatggaagggagaattatatcaaaccacaaaatctggtagagaaattatt
gttgaaagccgttggacattagtacatgagtttggaaataaatcccaatgtatactcgtt
gtcaacacagaaatcacccaaaaaaagcaactagaagctcaatttcttcgcgctcaacga
ttagagagtattggcaccctagcgagtggtattgcccatgacctcaataatgttctggct
cctattttgatgacagcacaacttttagagtcacaaatcaaagatgaacgttctcagcga
ctattgccaatattgattactaacgctaagcgcggggctaacttagttaaacaagtatta
tcatttactcgcggtcttgaaggtgaacgcaccttattgcaattaaaacacctggttgga
gaaattcagcaaattattaaagaaacgtttcccaaatcaattgaattggcggcgcacatt
tcccagaatctttggactgtttctggtgatgctacccaattacatcaagtactgatgaac
ttgtgtgttaatgcccgtgatgctatgcccaagggtggtactttgaaaatcacggcggaa
aacttcttgatagacgaaaattatgccagaatgaatatagatgccaaagttggcccctat
gtagtagttacagttactgatacgggaattggtatttcctcagacatactagatcggata
tttgagccattctttaccacgaaagaattgggtaaaggcacaggattaggactttcaacc
gtacttggcattattaaaagtcacggcggttttattaatgtatatacagaagagggggaa
ggcagccagtttaaagtgtatctacctgctcaggataccaaagagcttttagaagaagca
gcgctagaattatctccaggaaatggagagttaatcttagttgttgatgatgaagctgct
attagagatattacgaaaacatctctagagtcttataattataaagcaattacagctagt
gatggaattgaggcgatcgccttatatgcagaacgccaagacgaaatctctttagtgttg
acggatatggtaatgccctctatggatggcttaacaactattcggacattacaaaaaatt
aatcctcttgtaaaaataattgctgttagtggcttggctgctcatgataaagtcaacgca
gcttataatatgggtatccaagcatttttatcgaagccatacactgctaaccaactatta
aaaacaattaatgcagtccagcataagaattaa
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